Detail



ID : Ahg917547

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|917547|Al_scaffold_0008_2298
Sequence
ATGATGCAGC TCCATTTCCA GATTTATGTT GGTCCAATAT TTGCCTTGAG ACCCTCAAAG GGGTTCTTGT CTGCTTGTCT TGTGTCTTTC TTGTTAGTCA CAACTACTTT CTGCTCTTTT GCTATTGCGG ACCTGAACTC GGATAGGCAA GCTCTTCTTG CCTTTGCTGC TTCTGTTCCT CATCTTAGAC GGCTCAACTG GAATTCCACT AACCATATCT GCAAATCATG GGTTGGCGTC ACCTGCACTT CTGATGGTCT TAGTGTTCAC GCTCTTCGCC TTCCGGGAAT TGGACTCTTG GGACCAATCC CTCCAAACAC ACTTGGTAAA CTAGAATCAC TCAGGATTCT CAGTTTGAGA TCAAACCTCC TCAGTGGTAA CCTTCCTCCT GATATTCACT CTCTCCCTTC ACTAGATTAC ATCTTTCTAC AACATAACAA CTTCTCTGGT GAGGTTCCTT CCTTTGTGTC CCCACAGCTC AATATCCTAG ATCTCTCCTT TAACTCTTTC ACCGGGAAGA TACCAGCAAC GTTCCAAAAT CTGAAGCAAT TGACAGGGTT AAGCCTCCAA AATAACAAAC TTTCTGGACC AGTACCTAAT CTTGATACAG TAAGTCTGAG ACGGTTAAAC TTGAGCAACA ATCATCTTAA TGGTTCAATA CCCTCTGCAC TTGGTGGGTT TCCCAGTTCA TCTTTTTCCG GAAACACATT GTTATGTGGA CTTCCTCTGC AACCCTGTGC CATTTCCTCT CCCCCTCCTT CTCTTACCCC GCACATCTCC ACGCCTCCAT TGCCGCCATT TCCTCACAAA GAAGGTTCAA AAAGGAAACT ACATGTAAGC ACTATCATTC CTATTGCAGC TGGTGGGGCT GCACTGCTGC TGTTAATCAC CGTAGTTATC TTGTGTTGCT GTATCAAGAA AAAGGACAAG AGGGAAGACA GCATCGTAAA AGTAAAGACT TTGACTGAGA AAGCAAAGCA AGAATTTGGA AGTGGGGTGC AAGAACCTGA GAAGAATAAG CTGGTGTTCT TTAATGGATG CTCCTATAAC TTTGATCTAG AGGATTTGTT GAGGGCATCA GCGGAAGTAC TAGGAAAAGG TAGCTATGGG ACAGCATACA AGGCTGTCTT AGAGGAATCC ACAACTGTTG TGGTAAAAAG GTTGAAGGAA GTGGCAGCTG GAAAGAGAGA GTTTGAACAG CAAATGGAGA TTATCAGTCG GGTCGGGAAC CATCCTAGCG TGGTTCCCCT CCGTGCATAT TACTACTCCA AGGATGAGAA GCTCATGGTT TGTGATTATT ACTCTGCTGG TAACTTATCA TCACTCCTCC ATGGTAACCG GGGAAGTGAG AAAACGCCTC TCGACTGGGA CTCCAGAGTA AAAATCACAC TATCAGCCGC AAAAGGTATA GCTCATCTCC ATGCAGTTGG AGGTCCAAAG TTCAGTCATG GAAACATAAA GTCCTCAAAT GTGATTATGA AGCAGGAGAG CGATGCATGC ATTTCTGACT TTGGACTGAC CCCTCTGATG GCTGTGCCCA TTGCTCCAAT GAGGGGTGCA GGCTACCGCG CACCAGAAGT AATGGAAACA AGGAAACACA CACATAAATC CGATGTTTAC AGTTTCGGTG TACTTATACT AGAGATGTTG ACTGGGAAGT CTCCAGTGCA GTCGCCAAGC CGAGATGACA TGGTTGATCT CCCCAGGTGG GTTCAGTCAG TTGTGAGAGA GGAATGGACA AGCGAGGTGT TTGATGTTGA GCTGATGAGG TTCCAGAACA TTGAAGAAGA AATGGTACAG ATGCTGCAGA TTGCTATGGC ATGTGTAGCT CAAATGCCTG AGGTGCGACC CACCATGGAT GATGTCGTTA GAATGATTGA AGAGATACGA GTTTCAGACT CTGAGACCAC CCGGCCATCT TCTGATGACA ATAGCAAACC CAAGGACTCC AACGTTCAAG TTCAAATCAC CCCTTGA 
Length1977
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17374505.. 17376563
Download Sequence
A.thaliana
AGI-codeAT5G58300.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg476070 DHHC-type zinc finger family protein
10.4881 Ahg941090 NSP-interacting kinase 1
14.9666 Ahg488255 Leucine-rich repeat protein kinase family protein
16.7033 Ahg947562 RING/U-box superfamily protein
18.7617 Ahg941132 chloroplastic acetylcoenzyme A carboxylase 1
19.4165 Ahg316857 Rad23 UV excision repair protein family
29.6985 Ahg926848 IQ-domain 31
31.3209 Ahg481491 Leucine-rich receptor-like protein kinase family protein
33.3317 Ahg476005 RNI-like superfamily protein
35.3695 Ahg951089 Dof-type zinc finger DNA-binding family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression