| Annotation |
|---|
| Description | jgi|Araly1|941090|scaffold_601634.1 |
| Sequence |
TTCCTTTCTC TCTGTTTCAA CAATGGAGAG TACTATTGTT ATGATGATGA TGATAACAAG ATCTTTATTT TGCTTCTTGG GATTTCTATG CCTTCTCAGC TCTTCTGTTG ACGGATTGCT TTCTCCTAAA GGAATTAACT TTGAAGTGCA AGCTTTGATG GACATAAAAG CTTCATTACA TGATCCTCAT GGTGTTCTTG ATAATTGGGA TAGAGATGCT GTTGATCCTT GTAGTTGGAC AATGGTCACT TGTTCTTCAG AAAACTTTGT CATTGGCTTG GGCACACCTA GTCAGAATTT ATCTGGTACA TTATCTCCAA GCATTACCAA CTTAACAAAT CTTCGGATTG TGCTGCTGCA GAACAACAAC ATAACAGGAA AAATTCCTAC TGAGATTGGT CGGCTTACAA GGCTTGAGAC TCTTGATCTC TCTGATAACT TCTTCCGCGG TGAAATTCCT TTTTCAGTAG GCTATCTACG AAGCCTGCAA TACCTGAGGC TAAACAACAA TTCTCTCACT GGAGTTTTTC CTCTGTCACT ATCTAATATG ACTCAACTTG CATTTCTTGA TTTATCATAC AACAATCTTA GTGGTCCTGT CCCAAGATTT GCTGCAAAGA CCTTTAGCAT CGTTGGGAAC CCGCTGATAT GTCCAACGGG TACCGAACCA GACTGCAATG GAACAACATT GATACCTATG TCTATGAACT TGAATCAAAC TGGAGCTCCT TTATACACCG GTGGATCGAG GAATCACAAA ATGGCAATCG CTGTTGGATC CAGCGTTGGG ACTGTATCAT TGATCTTCAT TGCTGTTGGT TTGTTTCTCT GGTGGAGACA AAGACATAAC CAAAACACAT TCTTTGATGT TAAAGATGGG AATCATCATG AGGAAGTTTC ACTTGGAAAC CTGAGGAGAT TCGGTTTCAG GGAGCTTCAG ATCGCGACGA ATAACTTCAG CAGTAAGAAC TTATTGGGGA AAGGTGGCTA TGGAAATGTA TACAAAGGAG TACTTGGAGA CAGTACCGTG GTTGCAGTGA AAAGGCTTAA AGATGGAGGA GCATTAGGAG GAGAGATTCA GTTTCAGACA GAAGTCGAAA TGATCAGTTT AGCTGTTCAT CGAAACCTCT TAAGACTCTA TGGTTTCTGC ATCACGCAAA CTGAGAAGCT TCTGGTTTAT CCTTACATGT CTAATGGAAG TGTTGCATCT CGAATGAAAG CAAAACCGGT TCTGGACTGG AGCATAAGGA AGAGGATAGC CATAGGAGCT GCAAGAGGTC TTGTGTATCT CCATGAGCAA TGTGATCCGA AGATTATCCA CCGCGATGTC AAAGCAGCGA ATATACTTCT GGATGACTAC TGTGAAGCTG TGGTTGGAGA TTTCGGTTTA GCTAAACTCT TGGATCATCA AGATTCTCAT GTCACAACCG CGGTTAGAGG CACGGTGGGT CACATTGCTC CAGAGTATCT CTCAACTGGT CAATCCTCTG AGAAAACCGA TGTTTTTGGG TTTGGGATTC TTCTTCTTGA GCTTGTAACC GGACAAAGAG CTCTTGAGTT TGGTAAAGCG GCTAACCAGA AAGGCGCGAT GCTTGACTGG GTGAAAAAGA TTCATCAAGA GAAGAAACTT GAGCTACTTG TGGATAAAGA GCTGTTGAAG AAGAAGAGCT ATGATGAGAT TGAGTTAGAC GAAATGGTAA GAGTAGCTTT GTTGTGCACA CAGTATCTGC CAGGACATAG ACCAAAAATG TCTGAAGTTG TTCGAATGCT GGAAGGAGAT GGACTTGCAG AGAAATGGGA AGCTTCTCAA AGATCAGATA GTGTTTCAAA ATGTAGCAAC AGGATAAATG AATTGATGTC ATCTTCAGAC AGATACTCTG ATCTTACTGA TGACTCTAGT TTACTTGTGC AAGCAATGGA GCTCTCTGGT CCTAGATGAA CTCTATACAT GAATGTGAAG |
| Length | 1960 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 6244233.. 6247013 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G16000.1 |
| Description | NSP-interacting kinase 1 |
| TAIR curator summary | NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). |
| Alias | [AtNIK1][NIK1][NSP-interacting kinase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.4881 |
Ahg917547 | Leucine-rich repeat protein kinase family protein |
| 17.6918 |
Ahg479073 | |
| 20.2731 |
Ahg481491 | Leucine-rich receptor-like protein kinase family protein |
| 20.9284 |
Ahg941503 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 30.9839 |
Ahg490550 | Plant-specific transcription factor YABBY family protein |
| 33.3617 |
Ahg487048 | Ribosomal protein S24e family protein |
| 34.9428 |
Ahg477698 | SET-domain containing protein lysine methyltransferase family protein |
| 37.229 |
Ahg480193 | O-Glycosyl hydrolases family 17 protein |
| 37.3095 |
Ahg472343 | Protein of unknown function, DUF547 |
| 37.5899 |
Ahg491249 | Leucine-rich repeat protein kinase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|