Detail


ID : Ahg917774

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|917774|Al_scaffold_0008_2525
Sequence
ATGGGTTCCG ATTCCGAATA TGCTTTTCGG TTACAGATGG AGGAGGCACT CGCGGCTTCT CTATCTTCTC AATCTCGCAC TCCTCAACGA CCACCTTCTC CTCCGATTGT GGCTTGGTGT GGTATCGCTA TCGTTGAAAA CGATCGGAAC GGTTCGACGA CGGCTAAAAA AAGTAGCGGT TACGGTTTCG ATTTTAGGAG AGCCATCGGC GGAGGAAACT CTAAAGGCAA AGGCAAAACC AACGAGTCTG TCACTGGTGT ACGTACAGAT GAACCAAACC CTAACATTGG GCTTGGTAAC TCCCGGAGTA CTTCCGGACA CGATAATATG AAACCCTTGC CGCAGGTAAC TGTTCGTCCG GCGCAATTAG TCGGTGAGGC ATCATGCAAC ACTTTTCATC TTGTCAGCAT GTTCTGGTGG CTGGAAACGA TGTTAAATTT GCTTATAAAC TTCCAAGGGA ATCAATACTT TCTACGGTCA CCCCTCATGA AGATCCTCGC CAAGCAAAAT CAGCTCGGAA AGAGGAGTGT GCTATCTGTT TCAACGATAT CCCTTGCTGA GCGCATGTTT TCTGTTGGAA AATGCCGTCA CCGCTTTTGC TTTCAATGTG TGAAACAACA TGTTGAGGTG AAGCTGCTTC ATGGAATGGT TCCGAAATGT CCTCACGATG GCTGCAAGTC TGAGCTGGTT ATCGATGCCT GTGGCAAGCT TTTGACTCCA AAACTGAGTA AAATGTGGCA ACAAAGACTT AAAGAGAATG CGATACCTGT CACAGAGAGA GTTTACTGCC CTTACCCGAG GTGCTCGGCT TTGATGTCCA AGACCAAGAT TTCTGAATCT GCCAAGAGCT TACTGTCTGT TTACCCTAAA TCTGGAGTTA GGAGATGTGT TGAATGTCGT GGCCTCTTCT GTGTGGACTG TAAAGTTCCG TGGCATGCAA ATCTGTCCTG CACTGAGTAT AAGAAATTGC ATCCTAACCC TCCAGCAGAT GACGTGAAGC TAAAATCTCT TGCGAACAAT AAGATGTGGC GCCAATGTGG CAAGTGCCAA CACATGATTG AACTTTCACA AGGATGCAAT CACATAACTT GCAGATGTGG GCATGAGTTT TGCTACAATT GCGGAGGTGG ATGGAACAAG AAAATGAGGA CTTGTGTAAA TCGCTGCCCG GCCTGGAACG AAGAATACAT CACACGTGAA GATCCAGTGC GTGCCAATGT GGCGCCTAAC AACTACTTTG ATGATGAGGA TGAGGACAGT GATGATGATG ATTACGACTA TGAAGACTTC TTCCACCCTC ATTTTGGACA TGCTATGAAT GCTCATAATC CTGAAGAGCC CTTCGACCCC TTCTTCGACT TGCCAGATGG TGTGATCTTT ACCCCCGAGA TGTTGTCTCC CAAGAGTCGT CTCCAATTGT ACATGGCGGA AGCAGATGAG GATTGCGAAT ACTTTGGGAA GTATGGAAAG TACACTACAG TGTACGACTC CGACGGCTAT GAAATCGAGG ACTACACGAA CCCTTTCCAT CCTGATTACC CTCACTTCTG A
Length1551
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18279421.. 18281897
Download Sequence
A.thaliana
AGI-codeAT5G60250.1
Descriptionzinc finger (C3HC4-type RING finger) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.4881 Ahg949566
12 Ahg494278
18.7083 Ahg919569 arogenate dehydratase 6
21.6333 Ahg928115 Cytidine/deoxycytidylate deaminase family protein
27.7128 Ahg347079
32.45 Ahg470832 RNAligase
35.9444 Ahg486932 RING/U-box superfamily protein
37.108 Ahg352549 RNI-like superfamily protein
41.833 Ahg343136 UDP-glycosyltransferase 73B4
42.7785 Ahg490600 MATE efflux family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression