| Annotation |
|---|
| Description | jgi|Araly1|918929|scaffold_100210.1 |
| Sequence |
CTGCTAATTG TGAACCGAGA ATGGTGAAAT CAGCAGCTTG TTCTTCTTCT CCGGTGACTA TAACGGTGAC ACCATGTAAA GGATCCGGCG ACAGAAGCTT AGGATTGACG AGTCCTATCC CACGCGCCTC TGTTATCAAC AATAACCAAA ACTCTCCTCT AAGCTCAAGA GCCACGCGTC GTACTTCCAT TAGCGGCGGA AATCGGAGAT CTAGTGGTGG TGAAGGAAGA TACTGTTCTA TGTCTGTGGA AGATCTAACG GCGGAGACGA CTAATTCCGA GTGCGTTTTG AGCTATACTG TTCATATTCC ACCTACGCCG GATCATCAAA CGGTGTTCGC TTCACAGGAG AGTGGTATGG GTGAAGAAGA TGAGATGCTA AAAGGGAATT CAAATAACAA AAGTTTCCTC TCTGGGACGA TTTTCACCGG TGGGTTTAAA TCGGTGACTC GTGGTCATGT TATTGATTGC TCTATGGATA GAGCTGATCC GGAGAAGAAA TCAGGTCAGA TCTGTTGGTT AAAAGGTTGT GATGAGAAAG TTGTTCATGG GAGATGTGAG TGTGGTTTCA AAATCTGTAG AGATTGTTAC TTTGATTGTA TCACAAGTGG TGGAGGCAAT TGTCCTGGTT GCAAAGAGCC TTACAGGGAT GTCAACGATG ATCCAGAAAC CGAGGAAGAA GACGAAGAAG ATGAGGCGAA ACCGCTTCCT CAGATGGGTG AATCAAAGCT TGACAAGAGG CTTTCGGTTG TGAAGTCGTT TAAAGCGCAG AATCAAGCTG GTGACTTTGA TCACACTCGG TGGTTGTTTG AGACTAAAGG TACTTATGGG TATGGGAACG CTGTTTGGCC TAAAGATGGG TATGGAATCG GGTCGGGTGG TGGTGGTAAC GGGTATGAAA CGCCACCGGA GTTTGGGGAG AGAAGCAAGA GACCTCTTAC TAGGAAAGTC AGTGTATCTG CTGCAATTAT CAGTCCTTAC AGATTACTCA TTGCACTGCG TCTGGTGGCT CTTGGTCTGT TCCTGACATG GAGGGTTCGC CACCCAAACC GAGAAGCAAT GTGGTTGTGG GGAATGTCAA CGACCTGTGA GCTTTGGTTT GCCTTGTCTT GGCTTTTGGA TCAGCTTCCA AAACTCTGTC CGGTTAACAG ATTAACTGAT TTAGGTGTTC TTAAAGAACG CTTTGAATCT CCTAACCTCA GGAACCCCAA AGGAAGATCT GATCTTCCGG GTATCGATGT GTTTGTCTCA ACCGCAGACC CTGAGAAAGA ACCGCCTCTG GTCACAGCCA ACACCATTCT TTCGATCCTA GCTGTTGATT ACCCTGTGGA GAAACTTGCT TGCTACTTAT CAGACGATGG AGGAGCTTTG CTAACATTCG AGGCCTTGGC TCAAACAGCT AGCTTTGCAA GTACATGGGT GCCATTCTGC AGGAAACACA ATATAGAGCC AAGGAACCCT GAGGCCTACT TTGGACAGAA GCGTAACATT CTCAAGAACA AAGTGAGGCT GGATTTTGTG AGGGAAAGGA GGAGAGTCAA GAGAGAGTAT GATGAGTTTA AGGTCAGAAT CAACTCATTG CCTGAGGCGA TAAGGAGAAG GTCTGATGCT TATAACGTGC ACGAAGAGCT AAGGGCTAAG AAGAAACAGA TGGAAATGAT GATGGGAAAC AATCCTCAAG AAACTGTTAA AGTTCCAAAG GCAACTTGGA TGTCAGATGG TTCTCACTGG CCAGGGACTT GGTCCTCTGG AGAATCCGAT AATTCCCGTG GAGATCATGC TGGAATCATT CAGGCAATGT TGGCTCCTCC AAATGCAGAA CCAGTTTATG GAGCAGAAGC AGATGCTGAG AACTTAATTG ATACAACAGA CGTTGACATC AGGCTACCAA TGCTAGTTTA TGTGTCCAGA GAGAAGCGGC CGGGTTATGA TCACAACAAG AAAGCAGGAG CCATGAATGC TTTGGTTAGA ACCAGCGCAA TAATGTCTAA TGGCCCATTC ATCCTCAATC TTGATTGTGA CCACTACATC TACAACTCCA TGGCTTTGAG AGAAGGAATG TGCTTCATGC TTGATCGTGG TGGCGATAGA ATCTGCTATG TTCAGTTCCC TCAGAGGTTT GAAGGTATTG ACCCAAATGA TCGTTATGCA AACCACAACA CTGTCTTCTT TGATGTTAGT ATGAGAGCTT TGGATGGACT TCAAGGTCCA ATGTATGTGG GAACTGGCTG TATCTTCCGA AGAACAGCTC TCTACGGGTT TAGTCCGCCG AGAGCAACTG AACATCATGG CTGGCTTGGA AGAAGAAAGG TCAAGATATC GCTGAGGAGA CCAAAAGCCA TGATGAAGAA AGACGATGAA GTTTCTTTGC CTATAAATGG AGAATACAAC GAAGAAGAGA ATGACGATGG AGATATTGAA TCTCTGCTTC TCCCAAAGAG ATTTGGTAAC TCAAACTCTT TCGTTGCTTC AATCCCGGTT GCTGAATACC AAGGGAGACT CTTACAAGAC TTGCAAGGCA AAGGCAAGAA CAGTAGGCCA GCTGGCTCAC TTGCTGTCCC ACGTGAACCA CTTGATGCAG CCACTGTAGC CGAAGCAATC AGTGTGATAT CTTGCTTCTA TGAGGACAAA ACTGAGTGGG GTAAAAGAGT TGGATGGATC TATGGATCAG TGACTGAAGA TGTAGTCACG GGATATCGAA TGCACAACAG AGGATGGAGA TCAATCTATT GCGTGACAAA GCGGGACGCT TTCCGTGGAA CAGCTCCAAT CAATCTAACG GATAGGCTTC ACCAGGTTCT GAGATGGGCA ACAGGATCTG TTGAGATCTT TTTCTCTAGG AACAATGCGA TCTTCGCAAC CAGAAGGATG AAGTTTTTGC AGAGAGTGGC TTACTTCAAT GTTGGAATGT ATCCATTCAC ATCGCTTTTC CTCATCGTCT ACTGCATTCT CCCTGCGGTT TCGCTCTTCT CGGGTCAATT CATAGTCCAA TCACTGAATA TAACGTTCTT GATCTATCTC CTCTCGATAA CACTCACACT CTGTATGTTA TCACTCCTTG AGATCAAATG GTCAGGCATA ACTCTCCATG AATGGTGGAG AAATGAGCAG TTCTGGGTAA TTGGAGGTAC AAGCGCACAC CCTGCAGCTG TTCTTCAAGG TCTTCTCAAG GTAATTGCAG GAGTCGATAT CTCGTTTACC TTGACTTCCA AGTCATCTAC ACCAGAAGAA GGAGAGGATG AGTTTGCTGA TCTGTATGCT GTGAAATGGA GCTTTTTGAT GGTTCCTCCA TTGACGATCA TGATGGTGAA TATGATTGCG ATTGCGGTGG GGCTTGCGAG GACTCTGTAC AGTCCGTTTC CGCAATGGAG TAAGCTTGTT GGAGGAGTGT TCTTCAGCTT TTGGGTGCTT TGTCATCTGT ATCCGTTTGC TAAAGGATTG ATGGGAAGAA GAGGCAGAGT TCCGACGATA GTGTTTGTGT GGTCAGGTTT GTTGTCGATT ATTGTGTCTT TGCTTTGGGT TTATATTAAC CCTCCTTCAG GGAAACAAGA CTATATGCAG TTTCAGTTCC CTTGATTTTC TTTGTTTGTG GTACAAGGCA TGAAAGTTCT TCTTTCTAGG CTTCATGTTT GTAATCAGAT ATTATAATTA CGATTTTTCA AAGTAAAGTC TCAA |
| Length | 3674 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 689540.. 693465 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G02730.1 |
| Description | cellulose synthase-like D5 |
| TAIR curator summary | Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems. |
| Alias | [ATCSLD5][CSLD5][CSLD5][SOS6][cellulose synthase-like D5][CELLULOSE SYNTHASE LIKE D5][SALT OVERLY SENSITIVE 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg481360 | early nodulin-like protein 14 |
| 7.14143 |
Ahg479423 | phragmoplast orienting kinesin 2 |
| 8.24621 |
Ahg494701 | Leucine-rich repeat protein kinase family protein |
| 11.0905 |
Ahg470918 | syntaxin of plants 111 |
| 11.8743 |
Ahg485528 | inflorescence meristem receptor-like kinase 2 |
| 13.8564 |
Ahg358300 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 14.8324 |
Ahg485479 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 16.2481 |
Ahg470351 | targeting protein for XKLP2 |
| 18.1108 |
Ahg350051 | glucan endo-1,3-beta-glucosidase-like protein 3 |
| 19.2354 |
Ahg487244 | biotin F |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|