Detail



ID : Ahg918976

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918976|scaffold_100257.1
Sequence
TTTTTTGCTC TCTGTGTAAC AATGGAGGAA GAATCTCACA CCGAAGAAGT AGAAATCCAA AACAAACTCG AAGTTGCTCC TGCATTGATT TCCGTTCATC CATCTCAGAA ATCTCTCGCT GTCGCTGTCG GTTCGGATCT TCGTGTATTC GATCTTATAG AGAATCGCCC AGTTAGTTTG GTGGATGAAT CTGATGGGCC TTCCCGTAAG GAATCCATTA GGGCTATTCG TTACAGTGCA AGTGGAAAGC TCTTTGTGTC CGCAGGCGAT GACAAACTAG TTAAGATTTG GTCTGCAGAT TCTTGGCGCT GTCTTAACAC AGTATGTTCT GAGAAGAGAG TTAGCGCAGT TGCTATAAGT AGCGATGATT CACATGTTTG CTATGCGGAC AAGTTTGGTG TTGTATGGGT GATCGAGCTG GATGGGATCA ATGAGGGTAA AACTTTACCT AGTAAGAAGG GTGCGCTGCT GCTTTCCCAT TATTGTAGTA TTATTACTAG CCTGGAGTTT TCCCCAGATG GTAGATATAT TCTTAGTGCT GATCGGGACT TTAAGATAAG GGTGACTGTT TTTCCCAAGA AGCCTCTAGA AGGGGCTCAT GAAATACAGA GTTTTTGTCT TGGACATTCA GAGTTCATCA CCTGCACAGC ATTTGTCAGC ACTCCAGAGC TTACTCAGGG ATACCTCATG TCTGGAAGTG GAGATTCAAC TGTTCGACTG TGGGATATTA CATCTGGGTC TCTTCTTGAC ACATGTGAAG TCAGTACAGT GGCAGGGCAT TTAGAGTTTA ATGAAAGTGA GTCGCTGACC CAAGTCACAG TTACCGACAT ATGCGCTATC CCGAATTCTT CTCTTGCAGC AGTGGCAATT CAAAGCTTTC AAGGAATACT CTTGTTAAGC TGTGATTTGA CAGCACATAC TCTCTCTATC ACAAAGGTGA TAAAAATCCC TGGAGAAAGT TTCATTCCTA CAAGTATAGC TGTAAGTGCA TCTTCAAAAT TACTATGGAT GGTATCAGGA GCCTCAAACC TGCCTGGTTC GAACCATCCT GGTTTTTCAA GGGTTCGGGT CATCTCGTGC CTTGAGACCG AATCTTCAAT CCTTGAAGAC GGGCAGATTC CAGGAGGGAC CAAACTGTTG GAGCAATTAC AAGGTAAAGT TCCAATAGAA GAGAGTGTAA TGAGTGCTGC GGCAGAAGCT GTGAGAGCGG CAATGTCCAG CCTTTTGATG AAGAAGCAAT ACTCTGAAGA GAAGAGAGAG TTCAGAAAAA GAACCAGAAA TGATAAGAAA ACCACACAAT GATTGCATTT TGCCAAAAAA AA 
Length1322
Protein Sequence
Protein Residue
Map Locationscaffold_1: 848396.. 850873
Download Sequence
A.thaliana
AGI-codeAT1G03110.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias[AtTRM82][TRM82][tRNA modification 82]
Gene coexpression
MR
MR Locus Description
6.55744 Ahg335256 ATP binding microtubule motor family protein
9.79796 Ahg897667
11.5758 Ahg491668 Transducin/WD40 repeat-like superfamily protein
15.3623 Ahg923204 DEA(D/H)-box RNA helicase family protein
17.1464 Ahg940355 DEA(D/H)-box RNA helicase family protein
21.7945 Ahg493916 ATP12 protein-related
22.8035 Ahg924144 Ribosomal protein S5/Elongation factor G/III/V family protein
28.9828 Ahg916789
30.5941 Ahg900568 60S acidic ribosomal protein family
31.5595 Ahg490030 Glycine cleavage T-protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression