| Annotation |
|---|
| Description | jgi|Araly1|924144|scaffold_105425.1 |
| Sequence |
CTTTCCTTTA TCTTTCTCTC TAGATTTTGT AGGTGACAAT CAAAAGTTTG ACAAAATGGT GAAGTTTACA GCTGATGAGC TTCGAAGGAT TATGGACTAC AAACACAACA TCCGTAATAT GTCCGTTATT GCCCATGTTG ACCACGGGAA ATCCACTCTC ACTGATTCCT TGGTTGCTGC TGCGGGTATC ATTGCCCAAG AGGTTGCTGG TGATGTTCGT ATGACTGATA CCAGAGCTGA TGAGGCTGAA CGTGGTATTA CTATCAAGTC CACTGGTATT TCTCTCTACT ACGAGATGAC GGATGCGTCC TTGAAGAGTT TCACTGGAGC CAGAGATGGC AACGAATACC TTATCAACCT TATCGATTCT CCTGGGCACG TTGACTTTTC TTCTGAGGTT ACTGCTGCTC TCCGTATTAC TGATGGTGCT CTTGTGGTGG TCGACTGTAT TGAGGGTGTG TGTGTTCAGA CTGAGACTGT TCTACGTCAG GCTCTTGGTG AGAGGATTCG ACCTGTCTTG ACTGTTAACA AGATGGACAG GTGTTTCCTT GAGCTTCAGG TTGATGGTGA GGAGGCTTAC CAGACTTTCT CCAGGGTCAT TGAGAATGCC AACGTTATCA TGGCTACCTA TGAGGATCCT CTCCTTGGTG ATGTTCAGGT ATACCCAGAG AAGGGAACTG TGGCGTTTTC TGCTGGTCTC CACGGTTGGG CGTTTACACT GACCAACTTT GCCAAGATGT ATGCTTCCAA GTTCGGTGTC GATGAAACTA AGATGATGGA GAGGCTCTGG GGTGAGAATT TCTTTGACCC TGCCACCAGG AAATGGAGTG GCAAAAACAC TGGTTCCCCG ACCTGCAAGC GTGGGTTTGT CCAGTTCTGC TATGAACCCA TCAAGCAAAT CATCGCTACT TGCATGAATG ACCAGAAGGA CAAGTTGTGG CCCATGTTGC AGAAGCTTGG TGTCACAATG AAGAATGATG AGAAAGAGCT TATGGGTAAA CCTCTAATGA AGCGTGTTAT GCAGACTTGG CTCCCTGCAA GTACTGCACT ACTTGAGATG ATGATCTATC ATTTGCCATC TCCCCACACT GCCCAGAGGT ACCGTGTTGA GAATCTGTAT GAAGGTCCTC TTGATGATCA GTATGCAAAT GCCATCAGGA ACTGTGACCC CAATGGACCT CTCATGCTCT ACGTATCTAA GATGATTCCA GCCTCTGACA AGGGTAGGTT CTTTGCCTTT GGTCGTGTCT TTGCTGGTAA GGTTTCTACT GGTATGAAGG TCAGAATCAT GGGTCCCAAC TATGTCCCTG GTGAGAAGAA GGATCTGTAT ACTAAGAGTG TTCAGAGGAC TGTTATTTGG ATGGGTAAGA GGCAAGAGAC GGTGGAGGAT GTCCCTTGTG GTAACACTGT TGCTATGGTT GGGCTGGATC AGTTCATCAC CAAGAATGCT ACATTGACTA ATGAGAAGGA AGTTGATGCT CACCCCATTC GTGCCATGAA GTTTTCTGTG TCTCCTGTTG TTCGTGTTGC TGTTCAGTGT AAGGTTGCAT CTGACCTTCC CAAGCTGGTT GAGGGTCTCA AGAGGCTGGC CAAGTCTGAT CCTATGGTTG TGTGCACAAT GGAAGAATCA GGTGAGCACA TTGTTGCTGG TGCAGGAGAG CTCCATCTTG AGATTTGTCT GAAGGATCTG CAGGATGATT TCATGGGTGG TGCTGAAATT ATCAAGTCAG ACCCTGTGGT CTCCTTCCGT GAGACAGTTA GTGATAGGTC TATTCGCACT GTTATGAGTA AGTCTCCTAA CAAGCATAAC CGTCTCTACA TGGAAGCAAG ACCCATGGAA GATGGTCTAG CTGAGGCGAT TGATGATGGA CGTATTGGCC CAAGGGATGA CCCTAAGATC AGGTCCAAGA TCTTGGCTGA GGAGTTTGGA TGGGACAAGG ATCTTGCAAA GAAGATCTGG GCTTTTGGAC CTGAAACCAC AGGGCCTAAC ATGGTTGTTG ATATGTGTAA AGGAGTTCAG TACCTTAATG AAATCAAGGA CTCAGTGGTG GCTGGTTTCC AGTGGGCGTC CAAGGAAGGT CCTCTATGTG AAGAGAACAT GAGAGGCATC TGTTTCGAGG TTTGTGATGT GGTGCTTCAC TCTGATGCCA TCCACAGAGG AGGTGGTCAG GTTATCCCAA CAGCCAGAAG GGTCATATAC GCTGCCCAGA TCACAGCTAA GCCCAGGCTT TTGGAGCCAG TTTACATGGT TGAGATCCAG GCACCAGAGG GAGCTCTTGG AGGAATCTAC AGTGTGCTGA ATCAGAAGCG TGGACACGTC TTCGAGGAGA TGCAGAGGCC AGGAACTCCG CTGTACAACA TCAAGGCATA CCTGCCTGTT GTGGAGTCTT TCGGATTCTC GAGTCAGCTT AGGGCAGCAA CCTCAGGACA GGCTTTCCCA CAGTGTGTGT TTGATCATTG GGAAATGATG TCTTCTGACC CTCTTGAGCC AGGTACTCAG GCTTCAGTTC TGGTGGCTGA TATCAGGAAG AGGAAGGGAT TGAAGGAACA GATGACTCCA CTATCTGATT TTGAAGACAA GCTTTAAGCT TTCACCAAGA CTAGCCT |
| Length | 2607 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 28197626.. 28200456 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G56070.1 |
| Description | Ribosomal protein S5/Elongation factor G/III/V family protein |
| TAIR curator summary | encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive. |
| Alias | [LOS1][LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.82843 |
Ahg934284 | Enolase |
| 3.16228 |
Ahg938186 | Aldolase superfamily protein |
| 3.16228 |
Ahg947029 | S-adenosyl-L-homocysteine hydrolase |
| 3.31662 |
Ahg940873 | phosphate transporter 3;1 |
| 3.4641 |
Ahg490823 | mitochondrial heat shock protein 70-1 |
| 6 |
Ahg478157 | ADP/ATP carrier 1 |
| 6.48074 |
Ahg477055 | vacuolar ATP synthase subunit A |
| 6.48074 |
Ahg496177 | GTP binding Elongation factor Tu family protein |
| 6.63325 |
Ahg489666 | GDP-D-mannose 3',5'-epimerase |
| 6.78233 |
Ahg914623 | eif4a-2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|