Detail



ID : Ahg919182

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919182|scaffold_100463.1
Sequence
AGGCATTTTA GTTGGTAAGG ATGATAATTG GGTGCAGCAC GCCAAGTGCA CATGTTCTAA CGAGTTCTCG GGCATTCAAA TCATCATCAT ACAGAGCTGC ATCAGGACGG ACTCAACATT ATCTTGCTCG AAGCTCATCG TCTGTCATAA AGAACTCTTG GGGATCACCT TCACCATTTA ATGAGCTTCC GAGAGTGTCA AGAGGTGTGC CTCTGTCATA TCTCTCAGCC TCGTCTTCTC TGCTTCTTAA TGGAGAACAA GGTAGTCTGT CTGGTACATT ACCTGTGTTA CCCGTCCGCA GAAAAACTCT TTTGACTCCA CGAGCATCAA AAGATGTTCC TTCTAGCTTC CGATTTCCCC CAATGACCAA GAAGCCACAA TGGTGGTGGA GAACTTTGGC ATGCCTGCCT TACCTAATGC CACTGCATGA AACTTGGATG TATGCAGAAA CCGCTTACCA TCTCCACCCA TTCCTAGAAG ATTTTGAATT CTTAACCTAC CCATTTCTGG GGGCCATCGG AAGATTACCA AGCTGGTTCC TCATGGCTTA CTTCTTTGTA GCTTATCTAG GGATAGTGCG AAGAAAAGAA TGGCCTCACT TCTTCAGGTT CCATGTAGTG ATGGGTATGC TGCTTGAAAT CGCACTCCAG GTTATAGGAA CCGTTAGCAA GTGGATGCCT CTTGGAGTCT ATTGGGGTAA GTTTGGGATG CATTTCTGGA CCGCTGTTGC ATTTGCTTAT CTGTTTACCG TCCTTGAAAG CATACGGTGT GCACTTGCGG GTATGTACGC AGACATCCCA TTTGTCTGTG ATGCTGCCTA TATCCAGATT CCGTACGACT AAGAAGAAAC AACATTAGAT CGTT 
Length864
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1590105.. 1591171
Download Sequence
A.thaliana
AGI-codeAT1G04940.1
Descriptiontranslocon at the inner envelope membrane of chloroplasts 20
TAIR curator summaryTic20 is believed to function as a component of the protein-conducting channel at the inner envelope membrane. Genes AT1G04940 and AT1G04945 were switched for the TAIR7 genome release to give consistency with MIPs annotation.
Alias[atTIC20][AtTic20-I][TIC20][Tic20-I][translocon at the inner envelope membrane of chloroplasts 20][translocon at the inner envelope membrane of chloroplasts 20-I]
Gene coexpression
MR
MR Locus Description
11.3578 Ahg473113 Ribosomal protein L34
15.8745 Ahg933932 Ribosomal L28 family
21.4476 Ahg473693 Ribosomal protein L21
21.9089 Ahg478735 Lysyl-tRNA synthetase, class II
21.9773 Ahg490441 Ribosomal L5P family protein
24.4131 Ahg473161
25.4165 Ahg485688 Cytochrome P450 superfamily protein
26.4953 Ahg952212 ribosomal protein L23AA
31.749 Ahg478856 Pyridoxal-dependent decarboxylase family protein
33.4664 Ahg475984 Ribosomal protein PSRP-3/Ycf65
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression