Detail



ID : Ahg478856

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478856|fgenesh2_kg.3__1557__AT3G14390.1
Sequence
CAAAACCCTG AAAATGGCGG CAGCTACTCA ATGTCTCTCC CAACCTTCAT CATCTCTAAA TCCATACCAA CTGAAGAACC AAACCTCACA ACTCTCCAGA ATCATCCCTA TCTTGTCTCT TAAATCCACA TTGAAGCCAC TTAAACGCCT CTCCGTGAAA GCCACCGCCG TTTCCCAAAA CTCCACCAAA ACCCTCACGA AGTTCGACCA CTGTTTCAAG AAATCATCAG ATGGGTTTCT CTATTGCGAA GGAACTAAAG TTGAGGATAT CATGGAGTCA GTCGAGAGAA GACCCTTTTA CTTATATAGT AAACCTCAGA TCACGAGGAA CCTCGAGGCT TATAAACAAG CATTGGAAGG TGTGACATCT GTCATTGGTT ACGCTATCAA AGCTAATAAC AATCTCAAGA TTTTGGAGCA TTTGAGGTCT TTAGGCTGTG GTGCTGTCCT CGTCAGTGGA AATGAGCTCA GACTTGCTCT TCTTGCTGGT TTCGATCCCA CAAAGTGCAT TTTCAATGGA AATGGCAAGT TGTTGGAAGA TTTAGTTCTA GCTGCTCAAG AAGGTGTTTT CGTTAATGTC GATAGTGAGT TTGACTTGAA TAACATTGTG GAAGCTTCAA GAATTTCTGG TAAGCAGGTC AATGTACTGC TGCGTATCAA TCCTGATGTC GATCCTCAGG TGCATCCATA TGTAGCTACT GGGAACAAGA ACTCAAAGTT TGGTATCAGG AACGAGAAGC TTCAATGGTT TCTGGATCAG GTCAAGGCAC ATCCCAAAGA GCTGAAGCTT GTTGGAGCTC ATTGCCATCT AGGCTCTACC ATTACTAAGG TGGATATATT CAGAGATGCT GCAGTTCTCA TGATTGAATA CATTGATGAG ATCCGGCGTC AAGGTTTTGA AGTTAGTTAC TTGAACATTG GTGGTGGTTT AGGGATAGAT TATTATCATG CCGGCGCTGT CCTTCCCACA CCCATGGATC TCATCAATAC CGTAAGAGAG CTTGTTCTTT CACGAGACCT GAATCTAATA ATCGAGCCAG GGAGATCTCT GATTGCAAAC ACTTGCTGTT TCGTCAATCA TGTGACTGGT GTGAAGACGA ATGGAACTAA AAACTTCATA GTGATTGATG GAAGTATGGC TGAGCTTATC CGTCCCAGTC TTTATGATGC TTATCAGCAT ATTGAGTTGG TCTCTCCTCC ACCGCCTGAA GCAGAGGTGA CCAAATTCGA CGTAGTGGGT CCTGTCTGTG AATCTGCTGA TTTCTTGGGC AAAGACAGAG AGCTTCCCAC TCCTCCACAG GGAGCTGGTC TGGTGGTTCA TGACGCTGGT GCATACTGTA TGAGCATGGC TTCCACTTAC AATCTCAAGA TGCGTCCTCC GGAGTACTGG GTTGAAGAAG ATGGGTCGAT CACTAAGATA AGGCATGCTG AGACGTTCGA TGACCATTTG CGTTTCTTTG AAGGTCTATG AACTCTGAGA TTTACTCATC GTTGTTGCTT TTTATTTGAA TTGTATGATT ATTCGGAATC AGGACCATAA TGCTATTGCT GTTTTAGATT TTCACATTCT GTGCTTTGAT TCAAAGTCCC CAATGAAGTA ATCATATGAA TAAGAAAAAG GTCACAAGTC AAGACAGAAA ATAAAAGGTG AATTTGTTTC TTCTTATTTA CTTCAAGTCC ATAGTTGTCC ATTGTCCAAA CACATAAAGA CTCATCTAAG CTTTCTTTCC ATAGCTATAG GAAGATTTTT TCAAGCTTTT TGTTCACAAA TTTGCTTGCA GAACAAAAGG CGAACACGCA ACCAATATCT ACATCATTAA TCAAGAACCT AAAACAAGAT AGTTCATAGT TCACAGGACA AGTAAAGTGA ATTTGGTTTA TTATGTAGTG AATTACCGTC ACTAGTAAAA TTTTATCATG GTTTATTAGG AAGATTCCAA AATAAACCTT TT 
Length1952
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5707213.. 5710328
Download Sequence
A.thaliana
AGI-codeAT3G14390.1
DescriptionPyridoxal-dependent decarboxylase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.55744 Ahg484328 Amidase family protein
6.63325 Ahg486312 ketol-acid reductoisomerase
7.48331 Ahg931226 SWIB/MDM2 domain superfamily protein
9.16515 Ahg348313 RNA-binding (RRM/RBD/RNP motifs) family protein
12.53 Ahg938800 phenylalanyl-tRNA synthetase class IIc family protein
13.4164 Ahg927888 cysteine synthase 26
13.6748 Ahg491238 SWIB/MDM2 domain superfamily protein
14.6969 Ahg930508 dehydratase family
15.8114 Ahg482933 pseudouridine synthase family protein
16.2173 Ahg923384 presequence protease 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression