Detail



ID : Ahg919369

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919369|scaffold_100650.1
Sequence
TCTCTCTCTA AGCCATAGCT ATGGTTTTAC CAGAGCTTCT AGTGATTCTA GCAGAATGGG TTCTTTACCG TCTTCTTGCT AATTCATGTT ACAGAGCTGC TAGAAAGCTT AGAGGCTATG GTTTCCAATT GAAAAATCTC CTAAGCCTCT CTAAAGCACA ATCTCAACAC AACAACTCTC ATCATCAACA CCAGCAACAA CAACAACAAA ATCAGCAAAA CCAGTCTCTT CAAGATTCTC TAAACCCTAT CTTCCCAAGC ATTACAAAGT ACCAAGAACT TGTAGACAAA AACAGAGCAT GCTCTGTTTC GTCTGATCAT CATCTTGATA CCTTTGTCTG CGACGTCGAT GGTGTTTTAT TAAGACAACA TTCGAGCAAA CACTTCCACA CGTTCTTCCC TTACTTCATG CTCGTGGCTT TTGAAGGAGG ATCGATCATC AGAGCGATCC TTCTCTTGCT CTCTTGTTCT TTCCTCTGGA CTCTGCAACA AGAAACCAAA CTCAAAGTCC TCTCTTTTAT TACCTTCTCT GGTCTTAAAG TCAAAGATAT GGACAACGTT TCTAGATCGG TTCTACCCAA ATTCTTCCTC GAGAACTTGA ATCTTCAGGT GTACGACATC TGGGCTCGAA CTGAGTACTC CAAAGTTGTG TTCACGAGCT TGCCGCAAGT GCTGGTGGAG AGGTTCCTCA GAGAACATCT CAACGCTGAT GATGTGATTG GGACTAAACT GCAAGAAATA GAAGTCATGG GGAGGAGAAT CTACACAGGC CTAGCTTCTG GTTCTGGTTT CGTCGTGAAA CATAAATCAG CTGAAGACTA CTTCCTCGAT AACAAGAAGA AGCCTGCTCT TGGAATTGGA TGCTCTTCAA GCCCACAAGA TCACATCTTC ATCTCCATTT GCAAAGAAGC TTATCTTTGG AATGAAGAAG AGTCCATGAA CGAGAACAAC ACACTGCCTA GAGAAAGATA CCCAAAGCCA TTGATATTCC ACGACGGGAG GTTGGCTTTC TTGCCAACAC CATTAGCTAC ATTAGCTATG TTCATATGGC TCCCTATCGG ATTCTTCCTC GCTGTCTTCA GGATCTCGGT AGGAGTCTTG CTTCCTTACC ATGTAGCCAA TTTCTTGGCT TCTATGTCCG GTGTTAGGAT CACTTTCAAG ACTCATAATT TGAATAACGG TCGTCCAGAG AAAGGTAAAA GTGGAGTCTT GTATGTATGC AACCATAGGA CCCTCCTTGA CCCAGTTTTC CTCACCACTT CGCTTGGCAA GCCCTTGACC GCGGTTACTT ACAGCCTAAG CAAGTTCTCC GAGCTCATAG CACCTCTCAA GACGGTTAGC CTTAAAAGAG ATAGGAAGAA AGACGGCGAG GCAATGCAGA GGTTATTAAG CAAAGGAGAT CTAGTGGTTT GTCCCGAAGG AACCACTTGT AGAGAGCCTT ATCTACTAAG ATTCAGTCCT CTGTTCGCTG AGTTAACAGA AGACATTGTT CCCGTGGCTG TGGATGCTCG AGTGAGCATG TTCTATGGGA CAACCGCGAG CGGGCTCAAG TGTTTAGACC CTATCTTCTT CCTCATGAAC CCTAGGCCGG TTTATTGTCT TGAGGTTTTG AAGCAGTTGC CAAAGGAGAT GACTTGTGCA GGAGGCAAGT CAAGCTTTGA AGTTGCGAAT TTCATACAGG GAGAACTTGC TAGGGTTTTG GGATTTGAAT GCACTAATCT CACAAGGAGG GATAAGTACT TGGTTCTTGC TGGAAATGAA GGCATTGTCA GATAAAATAA TCCGAATTTT CATTAGTTTT GTTTGTTTGT TTGAAAAGCA AAATATTATT GTTATTTCAG GACTTAGATG TTTAATTCTA TATGGTTGAT TCATTGGCAT CATTTCTATT TCTTATCACT CGGGACCATT GATATGTATT GGAAATGTTT GCTTTATATG ATTTTGTTTC TGGATTTGTA TA 
Length1962
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2219552.. 2221768
Download Sequence
A.thaliana
AGI-codeAT1G06520.1
Descriptionglycerol-3-phosphate acyltransferase 1
TAIR curator summaryEncodes a membrane associated mitochondrial localized protein with glycerol-3-phosphate acyltransferase activity.Expressed in flower buds and siliques. Homozygous mutant plants are male sterile and have abnormal glycerolipid levels.
Alias[ATGPAT1][GPAT1][sn-2-GPAT1][GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1]
Gene coexpression
MR
MR Locus Description
18.4391 Ahg482040 Plant protein of unknown function (DUF828)
34.5977 Ahg489265 chitinase A
39.8497 Ahg946749 Uncharacterised protein family (UPF0497)
51.2445 Ahg948640 microtubule-associated protein 18
60.3324 Ahg941373 Plant protein of unknown function (DUF946)
60.349 Ahg924719 Plant invertase/pectin methylesterase inhibitor superfamily protein
61.2454 Ahg472780 FAD-binding Berberine family protein
64.4826 Ahg493603 S-locus lectin protein kinase family protein
65.2227 Ahg475116 WRKY family transcription factor
67.164 Ahg902555 Plant invertase/pectin methylesterase inhibitor superfamily
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression