Detail



ID : Ahg919498

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919498|scaffold_100779.1
Sequence
GAGTTGAATA ATATCTGCAA ATGTCAAGTT TACTTAATTC CTCAATAAAC GGGTCTACCT CGAATTTGTC AGACGGTTCA GGGAGAACGT TTACTTCTTC TTTCTCCGGT CAGTCTGGGG CAGCTTCTCC AGCTTTCCAT CATGCTGGAT CTATTCAGGG CCTTCATAAT ATTCATGGAA ACTTTAATGT TCCCAACTTG GCGGGAAGTC TTGGATCAAG AAATTCAAGT CTAAACGGTG TTCCTTCTGC TGGTGTCCAA CAACAAAATG GAAGTATTTC GAATGGAAGA TTTGCATCCA GTAATATTCC GGTTGCACTC TCTCAGATAT CTCATGGTAG CTCCCATGGA CACTCAGGAC TCACTAATAG GGGAGGATTG GGAGTTTCTC CAATTTTGGG AAATGCAGGT TCTCGAATGA CAAGTTCTAT GGGGAATATG GTTGGTGGAG GCACAATGGG TAGGACTTTG AGCTCTGGTG GAGGATTATC GATTCCGAGT CTTGGTTCGC GGCTAAATCT GGCAGTAAAT AGCGGATCCG GAAATATTGG ACAAAATCGC ATGATGGGTG GGGTCTTGCC ACAAGGATCT CCGCAGGTTC TTTCGATGCT AGGAAATTCT TACCCTTCAG CTGGAGGACT TTCCCAAAAT CATGTTCAAG CAATGAACAG TCTAAGCTCT ATGGGGTTGC TGAATGATAT GAACTCCAAC GACACTTCTC CGTTTGATAT TAATAATGAT TTTCCTCAGC TCACAAGCCG CCCCACCTCT GCCGGCGGTC AAGGACAATT GGGGTCTCGA TTGAAACAAG GCCTTGGAAT CAGCCCTATA GTTCAGCAAA ACCAAGAGTT CAGCATCCAA AATGAAGATT TTCCAGCATT GCCAGGATAT AAAGGTAGTA ATGCTGATTA TCCAATGGAT TTGCATCATA AAGAACAACT CCATGAGAAC TCAGTTTTAA TGATGCAATC TCAACAATTA TCTATGGGAA GGTCTGGTGG GTTTAACTTA GGTGGACCAT ATACATCACA CCGTCCTCAA CAACAGCAAC AACATGCTCA AGCTGTGAGT AGTAGTGGTA TTTCCTTACA TGGGTCTGAC ATCTTCTCAT CTTCGCATCC GTCGTACCAC TCGCAGACTG GTGGACCTCC GGGTATTGGA TTAAGATCTA TGAATTCTGC AAATTCTGTC ACTGGGATGG GTACTTATGA CCAGCAGCTC ATCCAGCAAT ATCAGCAACA ACAGAACACA TCCCAGTATC GCTTGCAGCA GATGTCAGCT GTTAGCCAAC CTTTCAGAGA TGGGGGATTA AAACCAATGC AGGCGACACA GTCAAATCCT GATCGGTTTG GCTTGCTTGG TTTGCTCAGT GTGATAAAGT TGAGCGACCC TGACTTGACG TCTTTGGCCC TTGGTATTGA TCTGACAACA CTGGGGTTAA ATTTGAACTC AACAGAAAAT CTTCATAAGA CTTTTGGCTC GCCTTGGTCC AATGAACCCT CTAAAGGTGA TCCAGAATTC AGTGTACCGC AATGTTACTA CGCAAAAAAC CCTCCACCCC TACACCAAGG GCTCTTTGCA AAATTATTGG TAGAAACATT GTTTTACATA TTCTATAGCA TGCCGAAAGA TGAGGCGCAA CTATATGCGG CAAATGAACT TTACAATAGG GGTTGGTTCT ACCACAAAGA ACACAGGTTG TGGTTCATTA GAATCGGGGA ACCTCTCGTG AAAACAAATG TGTATGAAAG AGGATCATAT CACTGTTTTG ATCCAAACTC ATTTGAGATC GTTCAAAAGG AAAATTTTGT TCTCTATTAC GAGATGCTGG AAAAAAGACC ATCCCTATCT CAAGATTCTC AACATTGAGT GTAAACTATG CCGCCTTC 
Length1888
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2679692.. 2683510
Download Sequence
A.thaliana
AGI-codeAT1G07705.2
DescriptionNOT2 / NOT3 / NOT5 family
TAIR curator summary
Alias[NOT2a][Negative on TATA less2a]
Gene coexpression
MR
MR Locus Description
4.58258 Ahg479402 transducin family protein / WD-40 repeat family protein
4.69042 Ahg489110 alkaline/neutral invertase
9.64365 Ahg476389 tRNA synthetase beta subunit family protein
10.9087 Ahg951055 H(+)-ATPase 11
14.6969 Ahg471077 U2 small nuclear ribonucleoprotein A
15.0997 Ahg940930 aldose 1-epimerase family protein
15.6844 Ahg344346
19.4165 Ahg926502 ARM repeat superfamily protein
21.9089 Ahg929218 Tetratricopeptide repeat (TPR)-like superfamily protein
22.1359 Ahg923204 DEA(D/H)-box RNA helicase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression