Detail



ID : Ahg929218

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929218|scaffold_301675.1
Sequence
TTGAGGGGGG AAATCACAAG AATGATGATC GGAAAATTGT GTAGATCTGT GGGAACCGTC GGAAAGTGTG ATGGTCGGCA TTATGGCGTG AGGACGATGG TTGGAAAAGC CTCGAACCGA GCTGGTGTTC ATGGTTCGAA ACTTCCCAAC GCTAAACCCA AAGAAGAGGA TAGTTTGAAT TTTCGCCTTC TCTCGCTCCT GAATGTTGTC ACTACACAAG CTTATCTTAC TCCATTGAGG TCTCAAACTA TCAACCATGC TAAATTCTTA CAAATCCCAT GGAGACAATT TGTCTTCAAA AAGCCTTTAG GTCTCTGTAA ATCAACCAAA CTAGACGAAG CCGTGACCTT GATAGAGAAG TCATCAACCT CACCGTCCAA TCTCTCTACT CCCGAAGCTT ACACAGACCT ACTTCATGCT TGCATCTCCG CTAAATCGCT TCACCATGGT ATAAAAATCT GTTCTTTGGT TCTCAACAAT CCTAGTCTCC GTCACGATCC CAAATTGCTT AGCAAGCTCA TTACCCTTTT CTCGGTTTGT CGCCGATTGG ATCTCGCTCG GAAAATCTTC GACGATGTCA CTGATTCGAG TCTACTTACT GAGAAAGTCT GGGCAGCGAT GGCGATTGGG TATTCTAGAA ACGGGTCACC AAGGGACGCT TTGATCGTGT ATGTGGATAT GTTGTGTAGT TTCATTGAGC CTGGGAATTT TTCGATATCT GTGGCGTTAA AAGCTTGCGT GGATTTGAAA GATCTTCGGG TTGGTAGAGG AATCCATGGC CAGATTGTGA AACGGAAGGG GAAGGTTGAT CAAGTGGTGT ATAATGTGCT CTTGAAGCTT TACATGGAAC GTGGCTCATT TGATGATGCA CGTAAGGTGT TCGATGGAAT GTCTGAGAGA AATATTGTTA CTTGGAATTC TTTAATTTCG GTACTCAGCA AGAAAGTTCG GGTTCATGAG ATGATTAATT TGTTCAGAAA GATGCAGGAA GAGATGATTG GGTTTAGTTG GGCGACTTTG ACGACAATCT TACCCGCTTG TTCACGTGTC GCTGCTCTTC TCACGGGGAA AGAGATTCAT GCACAGATTC TGAAATCGAA AGAGAAACCT GATGTTCCGT TGCTTAATTC ATTGATGGAT ATGTATGGGA AGTGTGGAGA GGTTGAGTAT TCTCGGAGAG TCTTTGATGG GATGTTAACT AAGGATTTGA CTTCATGGAA CACGATTCTA AATTGTTATG CAATCAACGG AAATATCGAA GAAGTGATAA ATCTGTTTGA ATGGATGATA GAGTCAGGCG TCGCACCAGA TGGGATTACC TTTGTTGCTT TGTTATCCGG GTGTAGCGAT ACAGGGCTAA CGGAATACGG TATAAGTTTG TTTGAACGCA TGAAAACTGA ATTCAGAGTT TCACCGGCTT TGGAGCATTA TGCTTGTTTG GTTGACATCT TGGGCCGAGC TGGTAAGATC GAAGAAGCAG TCAAGGTAAT AGAAACAATG CCATTTAAGC CAAGTGCATC CATTTGGGGA TCACTGCTCA ACTCTTGCAG GCTCCATGGG AATGTTTCAG TGGGAGAGAT TGGAACTATG TTATGGCTTC TAACATATAT AGCTGAAGCA AAGATGTGGG ACAATGTGGA TAAGATTCGA GAGATGATGA AACAAAGAGG GATCAAAAAG GAAGCTGGTT GCAGTTGGGT ACAGGTGAAA GACAAGATTC AAATCTTTGT TGCAGGAGGT GGTTACGAGT TTCGTAATTC GGATGAGTAT AAGCAAGTAT GGACAGAACT ACAGGAAGCA ATTGAAAATT CCGGTTATTC TCCTGATACG AGCGTGGTGC TTCATGATGT TGATGAAGAA ACTAAGGCAA ATTGGGTTTG TGGACACAGC GAGAGACTCG CGACAACCTA CTCCCTAATT CACACAGGTG AAGGGGTTCC AATTAGGATT ACGAAGAATC TCAGAGTATG TGCAGACTGC CATTCATGGA TGAAGATTGT ATCGCAAGTA ACTGGGAGAG TTATAGTCCT CAGAGACACC AAACGATTCC ACCATTTCGT TGCCGGCATT TGCTCATGTA AAGATTACTG GTGACTGGTG AGGTATTATT CTAT 
Length2114
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5673059.. 5675761
Download Sequence
A.thaliana
AGI-codeAT3G14330.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.47723 Ahg480837 Tetratricopeptide repeat (TPR)-like superfamily protein
10.6771 Ahg320374 YebC-related
11.7473 Ahg929776 Mitochondrial transcription termination factor family protein
17.2047 Ahg478019 DEA(D/H)-box RNA helicase family protein
18.3303 Ahg489706 RNA-binding (RRM/RBD/RNP motifs) family protein
19.4422 Ahg938054 Mitochondrial substrate carrier family protein
21.9089 Ahg919498 NOT2 / NOT3 / NOT5 family
29.9333 Ahg486992 Fes1C
31.6228 Ahg494955 Pentatricopeptide repeat (PPR) superfamily protein
37.4967 Ahg480562 high-affinity nickel-transport family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression