Detail



ID : Ahg919870

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919870|scaffold_101151.1
Sequence
TTCTCCAGTT TCGTTTTGAA ATGGAACACT TCAAAAGGCT TATTTTTTTT GGCAAAGAAC TTCCTATCAG ATCCGTTCAG ATTAATGAAA CAACTGATCT AAATGAGCTA GTTGAAAAGG AGCCTTGGCT CTCGTCCGAG AAGCTGGTGG TGAAACCTGA CATGTTGTTT GGAAAGCGTG GCAAGAGTGG TTTGGTTGCC TTGAAATTAG ATTTTGCTGA TGTTGCCACT TTTGTGAAAG ACCGTTTGGG CAAAGAGGTA GAGATGAGTG GATGCAAAGG ACCCATAACA ACATTCATAG TTGAGCCATT TGTTCCACAC AATGAGGAGT TTTATCTTAA TGTTGTCTCG GATCGGCTTT TGTGCAGCAT AAGCTTTTCA GAGTGTGGAG GAATTGAGAT CGAGGAGAAC TGGGACAAGG TCAAGACAAT ATTTTTACCA ACAGGTGCTT CCCTGACACC TGAAATATGT GCACCTCTAG TGGCAACTCT TCCCTTAGAG ATCAAAGCTG AAATTGAAGA ATTTATCAAA GTCATTTTCA CCCTATTCCA AGATCTTGAT TTCACTTTCT TGGAGATGAA TCCTTTCACT CTAGTTGATG GAAGTCCTTA TCCTCTGGAT ATGAGGGGTG AATGGGGCGA CATTAAATTT CCTATGCCAT TTGGAAGAGT AATGAGTCCG ACAAAAAGCT TTATCCACAG ACTAGATGAG AAGACGACAA GTGCGTCTTT GAAGTTTACC GTTCTGAACC CCAAGGGACG GATTTGGACA ATGGTAGCTG GTGGAGGAGC AAGGGTCATC TATGCGGATA CCGTTGGAGA TCTCGGGTAT GCATCTGAAC TTGGCAACTA TGCTGAATAC AGTGGCGCAC CCAAAGAAGA TGAGGTTTTG CAGTACACAA GAGTAGTTAT AGATTGTGCT ACAGCAAACC CGGATGGAAA AAGCAGAGCT CTTGTGATTG GGGGTGGAAT TGCCAACTTC ACTGATGTTG CTGCCTGCTA CTTTCAATGG CATAATCCGC GAAGCAAAGC TGAAAGCAGC AAGGATGCAT ATATTTGTGA GAAGAGGAGG ACCAAACTAC CAAAGGGACT TGCTAAAATG CGAGCCCTTG GAGATGAAAT CGGTGTCCCC ATCGAGGTCT ATGGTCCAGA AGCAACCATG ACAGGTATCT GCAAGGAGGC AATCCAGTAC ATCACAGCAG CAGCATAAGC TTCTCTCAGT ACCTTAAG 
Length1228
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4041769.. 4044154
Download Sequence
A.thaliana
AGI-codeAT1G10670.3
DescriptionATP-citrate lyase A-1
TAIR curator summaryOne of the three genes encoding subunit A of the trimeric protein ATP Citrate Lyase. Antisense ACLA-1 plants cause a reduction in cytosolic acetyl-CoA metabolism and have upregulation of stress-related genes and down-regulation of primary metabolism and growth genes, suggesting the mutation restricts normal growth and developmental processes and puts the plant into a state of stress.
Alias[ACLA-1][ATP-citrate lyase A-1]
Gene coexpression
MR
MR Locus Description
38.4448 Ahg951519 ralf-like 34
56.3738 Ahg929671
76.1118 Ahg494344 3-ketoacyl-acyl carrier protein synthase I
79.8624 Ahg921841 glycosylphosphatidylinositol-anchored lipid protein transfer 1
83.9047 Ahg492126 microtubule-associated protein 65-2
99.6995 Ahg478856 Pyridoxal-dependent decarboxylase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression