Detail



ID : Ahg920143

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920143|scaffold_101424.1
Sequence
TCTTTGGGCT TAATCGGAAA ATGGACGTGC TTGCCTTATC CTCTTCCGCT TCCGCCGCTT CTCTAGCCGG AAACTTCCCG TTGTTTTCTT CTAGGGTTAA AGTGAGAAGA AACCGGGAGA ATTTATTAGC TAAACAGAAG AAGTTTTTAG TTTCAGCTTC GAAAAGAGAA GAGCCTAAGC TCAATGAATG GGATCAAATG GAGCTCAACT TTGGCCGTTT ACTAGGCGAA GACCCGAAAT TGACTTTGGC TAAGATAGTG GCTAGAAAAG TGAATCCAGA AGCTTCTTTT ATTGAAATTG AGAAATCTTT CTACAAGAAC AAAGGTAAAA TTCCTGAAGT TGAAGAGATT CCATTGGATT GGTCAAACGA TAAGAAGAAG AAATCTACTA GTTCACTGGA TGGGTTGAAA TTGGTAAAGC CTGTTCCGAA AGACGGAGTC AAGTTCGAAA AGCCAGTGAT GAAGAAGCCA AGCCCTGTTT TGAAGAAGCC ATTGGTGGAG GCTGCTGCTC CAAAGGTGCA GAGATTGCCT AATGTTATAT TGAGAAAGCC GAGTTCGTTT TATACTAGTA ATAATGATGA TGAGGAGTCT AAGTTGCGGT TGAAACCGAA TTTGACACTG AAAATGAGGA ATGAGAGAGA AAATGAGAGG TTTAGTGATA TGACATTGTT GAGAAAACCG GAACCAGTGA GCGTAGATGC AAAAGAGGAA AGTTCTGAAG ATAAGGTTAT CCCTGATGGG TTAACTATGG AGGAAGGAGG ACAAGAAGAT GTAACATATT CAGAGTATAC TCTTTTGGAG AAGCCAGAAG CAAGGTCTAA GCCTGAGAAC ATAAAAGAGG AAGTTGGAGA TAGCGGAGCA GTGGAATCAT CAGAGATAGA AAACAACTCA ATTCAGAAGC CAGAAGCAAG GCCAGAGCCT GAGAACGTAG AAAAGAATGT TGGAGATAGC GGAGCTATGG AATCATCTGA GATAGAAAAT AACTCAATTC CAACTGAAAT GCAGCTTAAC TGCAAGATGT CCTCGGGATC CTCCGAGGAG AGAACCATTA ACAGTGATCC ACTCGAGAGA ATTCCTTCGA AACCAATTTC TCAAACCATC GTAGAAGCTT CTTTACAAGG GAAACCACAA AGATTAGACC CGTCTTCCGC GGAGCCATCA GTTTCAAACA GAGGACAACC GTTAATCGTG AACCATGAAG GTCGTCAGGT CTCTGTTGAG CTCAAGGGCC CTCCTACCAG ATCGTCCTTG GAGGAAAATG ATTGGAATGA GGCAGAGTCT CTAGTTAAAA CAGAATTACG AGCAGATGTT GAGCTAATAA GTTCAAGCAC TAGAGGATTT GCTGTTTCCT ATGGATCTTT GATCGGATTT TTACCCTACC GGAACCTAGC AGCAAAATGG AAATTTCTCG CATTTGAATC ATGGTTAAGA AGAAAAGGTG TAGATCCATC ACTGTATCGA CAAAACCTTG GGGTAATCGG AGGTCAAGAT GTCACAAGTA AAGCTCCATC TCCAGATTCA AGCTTAGATT CTGAAGTCGC TACATCGATC AACGGAGAAG TTTCTTCTGA TATGAAGCTG GAAGATCTTC TTATGGTATA TGACAGAGAA AAGCAGAAGT TCCTGTCATC TTTTGTTGGC CAGAAAATCA AAGTGAATGT TGTTATGGCT AATCGAAACT CAAGGAAGCT TATATTTTCG ATGAGGCCGA GAGAAAATGA AGAGGAAGTT GAGAAAAAAC GAAATCTTAT GGCTAAGCTT CGTGTTGGGG ATGTTGTGAA ATGCTGCATC AAGAAAATTA CCTATTTTGG TATTTTTTGT GAGCTAGAAG GTGTCCCTGC ATTGGTTCAC CAGTCAGAAG TTTCATGGGA TGCAACTTTA GACCCTGCTT CATATTTCAA GATTGGTCAG ATTGTGGAAG CGAAAGTGCA CCAGCTAGAT TTTGCTCTTG AACGTATCTT CTTGTCGCTA AAAGAAATCA CGCCTGATCC TCTAACCGAA GCCTTAGAAT CTGTAGTTGG TGGTGATAAT GATCAGTTGG GGGGACGATT ACAAGCAGCA GAGCTCGACG CTGAGTGGCC TGACGTGGAA TCTCTGATCA AAGAGCTGGA AATGGTTGAA GGAATTCAAT CAGTTTCAAA AAGTCGTTTC TTCTTGAGCC CGGGTCTTGC TCCAACGTTT CAGGTTTACA TGGCTCCAAT GTTTGAGAAC CAATACAAAC TGCTTGCTCG AGCTGGAAAC AGAGTACAAG AGCTTATTGT TGAAGCATCG TTGAGCAAAG AAGAGATGAA ATCTACAATC ATGTCTTGCA CCAACAGAGT AGAATGAGAA TATTTTGAAG AATGGAT 
Length2347
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5064593.. 5068113
Download Sequence
A.thaliana
AGI-codeAT1G12800.1
DescriptionNucleic acid-binding, OB-fold-like protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.3527 Ahg474076 cytochrome c biogenesis protein family
15.4919 Ahg477281 ribosomal protein S17
16.9706 Ahg324510 cytidinediphosphate diacylglycerol synthase 5
21.9545 Ahg933932 Ribosomal L28 family
25.3377 Ahg489037 YGGT family protein
28.2843 Ahg358545 RNA-metabolising metallo-beta-lactamase family protein
28.4956 Ahg495542 Translation protein SH3-like family protein
38.2623 Ahg487637 Protein of unknown function (DUF1118)
39.0896 Ahg475984 Ribosomal protein PSRP-3/Ycf65
40.4969 Ahg318569 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression