Detail



ID : Ahg920320

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920320|scaffold_101601.1
Sequence
CGTCGAGCAG CCGCGCTTTT TGGCTGAGGA AGGAAAAAGA GAGACGCCAT GGGAAGAAGA CCTGCGAGGT GTTACCGTCA GATCAAGGGT AAGCCATACC CAAAATCTCG ATACTGTCGT GGTGTGCCAG ATCCAAAAAT CAGGATCTAC GATGTTGGAA TGAAGAGGAA AGGTGTTGAT GAATTCCCAT TCTGTGTCCA TTTGGTATCA TGGGAGAAGG AGAATGTGTC CAGTGAAGCA CTTGAAGCTG CACGTATTGC TTGCAACAAG TACATGGTGA AATCTGCAGG GAAAGATGCT TTTCATTTGA GGATTAGGGT TCATCCTTTC CATGTTCTCA GGATTAACAA GATGCTTTCC TGTGCTGGAG CTGATAGGCT TCAGACTGGT ATGAGAGGTG CTTTTGGTAA AGCTTTGGGT ACTTGTGCTC GTGTTGCTAT TGGACAGGTT CTTTTGTCTG TTCGTTGCAA GGATGCTCAT GGTCACCATG CTCAGGAGGC TCTTCGTCGT GCTAAGTTCA AGTTCCCTGG TCGTCAAAAG ATTATTGTCA GCAGGAAATG GGGTTTCACG AAGTTTAACA GAGCTGACTT CACCAAGTTG AGGCAAGAGA AGCGTGTTGT TCCTGATGGT GTCAACGCTA AGTTCCTCTC ATGCCATGGA CCTTTGGCTA ACCGTCAGCC GGGAAGTGCC TTTTTGCCAG CCCACTACTG AAGAGTATCA GAACTGAAGT CCTTTC 
Length736
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5741819.. 5742990
Download Sequence
A.thaliana
AGI-codeAT1G14320.1
DescriptionRibosomal protein L16p/L10e family protein
TAIR curator summaryEncodes a ribosomal protein L10 and may be involved in translation regulation. Semi-dominant mutations in SAC552 can suppress defects in acaulis5, which encodes a thermospermine synthase, by enhancing translation of acl5 and itself.
Alias[RPL10][RPL10A][SAC52][ribosomal protein L10][ribosomal protein L10 A][SUPPRESSOR OF ACAULIS 52]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg496177 GTP binding Elongation factor Tu family protein
2.82843 Ahg946494 Ribosomal protein L23/L15e family protein
3.4641 Ahg494257 Hyaluronan / mRNA binding family
3.74166 Ahg486730 ubiquitin 5
5.47723 Ahg919727 Translation protein SH3-like family protein
7.07107 Ahg483266 Ribosomal protein S5 family protein
7.34847 Ahg473757 ribosomal protein 1
8.30662 Ahg495335 RNA binding Plectin/S10 domain-containing protein
9 Ahg493205 Ribosomal protein L23/L15e family protein
9.16515 Ahg939059 Zinc-binding ribosomal protein family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression