Detail



ID : Ahg920393

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920393|scaffold_101674.1
Sequence
ACACTCTCTC TACGCTTGAC ATGGCCTTCG ATCTTCACCA TAGCTCAGCT TCAGATACGC CGCATTCATC AGAATCTCCG TCGTTTTCTC TCCCACCTTA TCCTGAGATG ATAATGGAAG CGATTGAGTC CTTGAACGAT AAGAATGGCT GCAACAAAAC GACGATTGCT AAGCACATCG AGTCAACTCA ACAAACTCTA CCGCCGTCAC ACACGACGCT GCTCAGCTAC CATCTCAACC AGATGAAGAA GAATGGTCAG CTTATCATGG TGAAGAACAA TTATATGAAG CCAGATCCAG ATGCTCCGCC TAAGCGTGGT CGTGGCCGTC CTCCGAAGCA GAAAATTCAG GCGGAATCTG ACGCCGCCGC TGCTGCTGCT GCCGCTGTTT CCGCAGATCC GCCTAGATCT CGCGGTCGTC CACCGAAGCC GAAAGATCCA TCGGAGCCGC CTAAGGAGAA GGTCGCTACC GGATCTGGAA GACCACGAGG ACGACCACCG AAGAGATCGA GAACAGATTC GGAGACGGTT GCTGCGCCGG AGCCGGCAGC TCAGGCAACC GGTGAGCGTA GAGGACGTGG GAGACCTCCG AAGGTGAAGA CGACGGTGGT TGCGCCGGTT GGGTGTTGAA TTATTCAGTA CTTATGCAAT 
Length650
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6022325.. 6023055
Download Sequence
A.thaliana
AGI-codeAT1G14900.1
Descriptionhigh mobility group A
TAIR curator summaryEncodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA.
Alias[HMGA][high mobility group A]
Gene coexpression
MR
MR Locus Description
10.9087 Ahg477690 Li-tolerant lipase 1
22.8473 Ahg942397
23.6643 Ahg946984
24.2487 Ahg485285 IQ-domain 21
28.9828 Ahg494383 GDSL-like Lipase/Acylhydrolase superfamily protein
30.6594 Ahg945946 SKU5 similar 4
30.7409 Ahg471757 CYCLIN A2;3
31.0322 Ahg480193 O-Glycosyl hydrolases family 17 protein
34.9857 Ahg487523 Eukaryotic aspartyl protease family protein
35.4401 Ahg490872 arabinogalactan protein 18
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression