Detail


ID : Ahg920607

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920607|scaffold_101888.1
Sequence
CGTCCAAGAA AGAAGCCGAC ATGGAAACAA AAGGGGCAGC ACAGTGGAGC TCTATCCTAG TTCCTTCTGT TCAAGAGATG GTTAAGGAGA AGACGATCAC GACCGTTCCT CCCAGGTATG TCCGGTCTGA TCAAGACAAA ACTAAAGTCG ATGATGATTT TGATGTGAAA ACCGAGATCC CAATCATCGA TCTGAAGCGT CTGTGTTCTT CAACCACCAT GGATTCCGAG GTTGAGAAAC TCGACTTCGC TTGCAAAGAG TGGGGATTTT TCCAGCTTGT AAACCATGGA ACAGAACCAA GTTTCTTGGA CAAAGTAAAG TCAGAGATTC AAGATTTCTT CAACCTTCCC ATGGAAGAAA AGAAGAAGTT CTGGCAGCGA CCAGATGAGA TTGAAGGTTT CGGACAAGCT TTTGTGGTTT CAGAAGATCA GAAACTAGAT TGGGCAGACT TGTTTTTCCA TACAGTGCAA CATGTTCAAT TACGCAAGCC TCACTTGTTC CCCAAGCTAC CTCTTTCCTT TAGAGATACA TTGGAGACGT ATTCTGCTGA AGTGCAGAGC GTAGCTAAGA TCTTAATAGC GAAAATGGCA AGCGCCCTAG AGACCAAACC AGAGGAACTG GAAAAGTTGT TTGATGATGT TGATTCGATT CAAAGTATGA GGATGAATTA CTACCCACCA TGTCCACAAC CAGATCAAGT TATCGGTCTA ACCCCGCATT CTGATTCGGT CGGACTCACC GTACTGATGC AGGTGAATGA AGTTGAAGGT CTCCAAATCA AGAAAGATGG GAAATGGGTT CCTGTTAAAC CTATCCCAAA TGCTTTCATC GTCAATATTG GAGACGTCTT AGAGATCATA ACTAATGGGA CATACAGAAG TATAGAGCAT CGTGGAGTTG TGAATTCAGA GAAAGAGAGG CTCTCTATTG CAACGTTTCA CAATGTGGGA ATGTATAAGG AAGTTGGTCC CGCAAAAAGC CTCGTTGAAA GACAAAAGGT TGCAAGATTC AAAAGGCTGA CCATGAAAGA GTATAGCGAT GGTTTGTTCT CTCGTACGCT CGACGGGAAA GCTTATCTCG ATGCTTTGAG AATCTAAAGA AAGCAATGCC TTGTGGCCC
Length1119
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6778829.. 6780492
Download Sequence
A.thaliana
AGI-codeAT1G17020.1
Descriptionsenescence-related gene 1
TAIR curator summaryEncodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.
Alias[ATSRG1][SRG1][SENESCENCE-RELATED GENE 1][senescence-related gene 1]
Gene coexpression
MR
MR Locus Description
7.61577 Ahg483895 myb domain protein 2
8.7178 Ahg482777
10.247 Ahg479668 1-deoxy-D-xylulose 5-phosphate synthase 1
12.7279 Ahg476541 Calcium-dependent phosphotriesterase superfamily protein
16 Ahg479663 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
23.7487 Ahg354029
24.3926 Ahg943294 Major facilitator superfamily protein
28.6182 Ahg470207 Polyketide cyclase/dehydrase and lipid transport superfamily protein
29.95 Ahg934714
30.8545 Ahg352273
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression