Detail



ID : Ahg479663

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479663|fgenesh2_kg.3__2364__AT3G21420.1
Sequence
TAGACTCTCA CTCTCTCACG ACTCACAGAG CAAAGAGCTA AAGTCCAAAA CCAAACACAC AAACAAAAAT CAAATTTTAT TTCTTGGTCT GCTTTCAAGA ATATGGCTCC TCTACCTATT TCTTCGATTA GAGTTGGGCA AATAGATGAT GTTCAAGAAC TGATAAAATC CAAACCAAAC AAAGTTCCGG AGAGATTCAT TAGAGAAGAG TATGAGAGAG GAGTCGTCCT GTCGTCTCTT AAGACTCATC ATCTTCATCA TCAGATTCCT GTTATTGATC TCTCTAAGCT CTCTAAACCC CACAATGATG ATTTTTTCTT TGAGATTCTT AAGCTCTCAC AAGCTTGTGA AGACTGGGGA TTTTTCCAGG TTATAAATCA TGGGATAGAC GTGGAGGTTG TGGAAGATGT AGAGAAAGTG GCTAAGGAGT TCTTTGATAT GCCGTTGGAG GAGAAGAAGA AGTATCCAAT GGAGCCAGGG ACCGTACAAG GTTATGGTCA AGCGTTTATC TTCTCTGAAG ATCAGAAACT TGATTGGTGC AACATGTTTG CCCTTGGTGT TCATCCTCCA CAAATTCGCA ACCCCAAACT ATGGCCCTCG AAACCGGCCA GGTTCAGTGA AAGTCTTGAA GGTTACTCAA AAGAGATAAG AGAACTATGC AAGAGGTTGT TGAAGTACAT AGCAATAAGC TTGGGTCTAA AAGAAGAGAG GTTTGAAGAA ATGTTTGGGG AGGCAGTGCA AGCAGTGAGA ATGAATTATT ACCCTCCATG TTCAAGTCCT GATCTTGTCT TGGGACTTAG CCCACATTCT GATGGAAGTG CTCTCACTGT TCTTCAACAG AGCAAGAACA GTTGTGTTGG CCTTCAGATC CTCAAAGACA ACACTTGGGT CCCTGTTAAA CCTCTTCCCA ATGCCCTTGT CATCAACATT GGTGATACCA TTGAGGTGCT AAGTAATGGG AAGTACAAGA GTGTAGAGCA TAGGGCAGTA ACAAACAGGG AAAAGGAGAG GCTTACAATA GTGACATTCT ATGCACCAAA CTATGAGGTT AAAATAGAAC CAATGAGTGA GTTGGTTGAT GATGAGACCA ACCCATGCAA GTATAGAAGC TACAATCATG GTGACTATAG TTATCACTAT GTCTCCAACA AGCTCCAAGG CAAGAAGTCC CTTGATTTTG CCAAGATTCT CAATTAAACT AATATTAGTT TCACCCCATC ACCCTCCATT AACTAGTTAC CACTTATTTG CTTTCTTTTT TTTAAGAAAA ATTATTTGTT GCAACTTTTG TGTGTATAAT GTATAGGAAT GTCCCCCACT TAGGGTTTTT AGTGTCATGA TTAAATTCCC CAATGTTAAT ACAACTTGTA ATATTTGGTA TGTATGTGTG TGGGTGG 
Length1397
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8951160.. 8953070
Download Sequence
A.thaliana
AGI-codeAT3G21420.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summary
Alias[LBO1][LATERAL BRANCHING OXIDOREDUCTASE 1]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg318977 O-acetylserine (thiol) lyase (OAS-TL) isoform A2
12.083 Ahg483895 myb domain protein 2
16 Ahg920607 senescence-related gene 1
17.7482 Ahg482040 Plant protein of unknown function (DUF828)
18 Ahg484673 NAC domain containing protein 3
19.799 Ahg470207 Polyketide cyclase/dehydrase and lipid transport superfamily protein
20.1246 Ahg485163
23.8747 Ahg478996 NAC domain containing protein 3
27.5681 Ahg475091 Flavin-containing monooxygenase family protein
28.0891 Ahg491447 potassium channel in Arabidopsis thaliana 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression