Detail



ID : Ahg920610

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920610|scaffold_101891.1
Sequence
TCTTCTCAGG TTCACTCTGA CATGAGCGTT AGTGCACCTT TCCTTGTTCT AGATGAAAAC AAGAAGATGA TGCTTTTGCC ATTGACTCTC CTTCACAATG AAGCTCCTGA TCCTGTTAAC ATTTCTTCTT GGACTGAAGT TCCTAATGTT TCTACAACTG CTGAGTTTCC TCTTCAAAAA TGGGTTCATG TGGGTTGCGA GGTTTCTAGA AACTACATGC GCCTTTATAT TTGTGGAGAG ATTGTAGGAG AGCAAGTCTT AACTTCCTTG ATGACCAATA GTACAAATTC AGATTGCGCA CGAAAGATAT CGTTATTCAG TGTTGGTGGA GATGGTTATA GTGTTCAGGG TTTCATCCAC TGTGCTGAAG TTTTGCCTTC TAATGTCCCG GCAAATTATC ACTACACAAA GGACCCACCT TTATGGTTAT CTGTTGATAA GCCATCTACA TCTGGAATTG GATTAGATAA AGATGGTGTT TGGATTATCG TTAGCGGAAC ATTTTGTTCC TTGGATGTTG TTTTAACCAA TGCTATTGGA CAGCCTGTGC ACAAGGATGT GAAGGTTGTG GCTTCTCTAC TGTATGCTGA TAGTGGGATG CCAGTTGAGA AGATGAGTGA CTCGGAGGCT CCCCTTTTGG TAAGCTATGA AGGAGTTGAA TTCTCTGCTG AAGATAAGCC ATGCAACTTA TTGAACGGAT GTGCTTCTTT CAAGCTCAAA TTATCTCAGC TTTCTTCCAA GAGTGATAAG AGATTGTTCT GTGTCAAATT CGAAATACCA GAAGTGAAGG CCTATTATCC TTTCCTTGAA ACTGTTACCA ACCAAATCCG TTGCATTTCG AGGAACCATG ATTCTCTTAC CCCTAAAAGG TCGAATCGCA TAGATTATCC ATTAGATGGA GGAGAACCAG AACTTGCTTC AAGAAGTAAT GGAACATCCG ACATTCTACA TAGCTCTTCC TCTATGAAAC GGATCAGATT AGGGGAAGAA AAGGTTTCTG AGAGTGAGAC TGAGAATGGA AATGGTACGA GTATGGAATG GAGACCTCAG AACCATGAAG AAGAAGACGA AGAAGATAAC TCTTCAACTG ATTCCGAAAA CACTGAAATT AGAGACTCGA CTGCTTTCAG GAGATATACA ATCTCAGACT CGATTATTTT CAAATACTGC CTTGGAAACT TAACAGAGAG AGCTCTTCTT CTGAAGGAAA TCACAAATAA TTCATCAGAT GAAGAAGTCT CGGAATTTGT AGATCAAGTT TCTCTCTATT CCGGATGCTT CCACCACAGC TATCAAATCA AAATGGCAAG ACAATTGATA GCAGAAGGAA CAAATGCGTG GAATCTGATA TCTCGGAACT ATCAACATGT TCATTGGGAC AATGTGGTAA TTGAGATTGA AGAACATTTC ATGAGAATAG CTAAATGCAG CAGTAGATCT CTCACTCACC AGGATTTTGA CCTTCTAAGA AGAATATGTG GATGCTATGA ATACATAACT CAAGAGAATT TTGAGAAAAT GTGGTGTTGG TTGTTCCCTG TTGCTTCGGC TATATCCAGG GGATTGATTA ACGGAATGTG GCGCTCAGCT TCGCCTAAAT GGATAGAAGG GTTTGTGACT AAAGAAGAGG CAGAACGTTC GCTTCAGAAT CAAGTAGCGG GAACTTTCAT TCTCAGGTTC CCTACTTCAA GAAGCTGGCC ACATCCTGAT ATTGTTGGTG CAGAAAATCC GGTTTTGATA TCTGCGGCTG AGCAAATCTT CAGTGCTGGT GGCAAGAGGA TGAGACCGGG TTTGGTATTC CTTGTATCAC GAGCCACTGC GGAATTAGCT GGCTTAAAGG AACTTACAGT AGAACATCGG CGTTTAGGTG AGATCATTGA GATGATTCAC ACCGCAAGTT TGATACACGA TGATGTGTTA GACGAAAGTG ATATGCGAAG AGGAAAAGAA ACGGTTCACG AGCTTTTCGG AACAAGAGTA GCTGTATTAG CTGGAGATTT CATGTTTGCT CAAGCATCAT GGTACTTAGC AAATCTCGAA AACCTCCAAG TCATTAAGCT CATAAGTCAG GTAATCAAAG ATTTTGCAAG CGGTGAGATA AAGCAAGCAT CAAGTTTATT CGATTGTGAT GTCGAGCTTG ATGACTACTT GCTAAAGAGT TACTACAAGA CAGCTTCATT AGTAGCTGCA AGCACCAAAG GAGCTGCAAT TTTCAGTAAA GTCGAAAGCG AGGTCGCAGA GCAAATGTAT CAGTTCGGAA AGAATCTCGG TTTATCTTTT CAAGTAGTTG ATGACATTCT GGACTTCACT CAATCCACAG AGCAGTTAGG GAAACCTGCA GCTAATGACT TAGCCAAAGG TAACATAACA GCGCCAGTGA TCTTCGCACT AGAGAATGAG CCGAGGCTAA GAGAGATCAT TGAGTCTGAG TTTTGTGAGC CTGGATCGCT TGAAGAAGCG ATTGAAATAG TTAGAAATCG CGGTGGGATC AAGAAAGCTC AAGAATTGGC TAAGGAGAAA GGTGAGCTTG CGTTAAAGAA TCTGAATTGT CTTCCGAGAA GTGGTTTCAG ATCGGCTCTT GAGGATATGG TGATGTTTAA TCTTGAAAGG ATTGATTAGC TTCAAAGGGT ATTTGGCAG 
Length2639
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21841267.. 21847175
Download Sequence
A.thaliana
AGI-codeAT1G17050.1
Descriptionsolanesyl diphosphate synthase 2
TAIR curator summaryEncodes a protein with solanesyl diphosphate synthase activity.
Alias[AtSPS2][SPS2][solanesyl diphosphate synthase 2]
Gene coexpression
MR
MR Locus Description
56.2139 Ahg934964 Ankyrin repeat family protein / BTB/POZ domain-containing protein
59.8498 Ahg915831 plasmodesmata-located protein 1
86.4292 Ahg488439 NAD(P)-binding Rossmann-fold superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression