| Annotation |
|---|
| Description | jgi|Araly1|921044|scaffold_102325.1 |
| Sequence |
AGTGAGTTTG AAGGATTAAG ATGGTTGGAA GCTCGGATGG TAACCAGTCA GATGATAGCT CTCATTTTGA GCGAGGAGTA GATCATATCT ATGAAGCATT CATCTGCCCA TTGACAAAGG AGGTTATGCA TGATCCTGTC ACTTTAGAGA ATGGCCGAAC ATTCGAGCGT GAAGCCATTG AAAAATGGTT CAAGGAGTGT CGGGATAGTG GGAGACCTCC ATCTTGCCCT TTGACTTCTC GTGAGCTCAG CAGCACTGAT GTAAGCCCCA GCATAGCTCT GCGTAACACT ATCGAAGAGT GGAGATCCAG GAATGATGCT GCCAAGCTTG ACATTGCTCG TCAGTCACTG TTTTTAGGAA ATGCTGAGAC CGATATTTTG CAAGCTTTGA TGCATGTGCG ACAGATTTGC AGGACCATCC GATTAAATAG GCATGGTGTA CGCAACTCTC AGCTTATCCA TATGATCATC GACATGTTAA AAAGTACTAG CCATAGAGTG CGGTATAAGG CTCTACAAAC TCTTCAAGTT GTCGTTGAAG GAGATGACGA GAGCAAGGCG ATAGTAGCTG AAGGGGACAC TGTGCGTACA CTAGTTAAGT TCTTATCACA CGAGCCATCA AAGGGGAGGG AGGCTGCTGT TTCCTTGCTG TTTGAGCTCT CTAAATCAGA AGCTTTGTGC GAGAAGATTG GTTCCATTCA TGGAGCACTT ATATTATTGA TTGGTCTGAC AAGCAGCAAC TCAGAAAATG TTTCAATTGT TGAGAAAGCT GATAGAACCT TGGAAAACAT GGAGAGGTCA GAGGAAATTG TTAGGCAGAT GGCTTCATAT GGTAGACTCC AGCCTCTTCT AGGAAAACTC CTTGAAGGCT CACCTGAAAC AAAACTCTCT ATGGCTTCCT TTCTCGGGGA GCTTCCCTTA AATAACGATG TGAAGGTTCT TGTGGCTCAG ACTGTGGGTT CTTCTCTTGT CGATCTTATG AGAACTGGTG ACATGCCCCA ACGGGAAGCT GCTTTGAAAG CTCTTAACAA AATCTCATCG TTCGAAGGGA GTGCTAAGGT CTTGATCAGC AAAGGAATTC TTCCCCCACT TATCAAAGAT CTGTTTTATG TGGGGCCAAA CAACCTTCCA ATTCGGTTGA AAGAAGTCTC TGCCACTATT CTTGCTAACA TAGTAAACAT CGGGTATGAC TTTGACAAAG TCACTCTTGT TTCAGACAAC AGAGTGGAGA ATCTGCTCCA TCTAATTAGC AACACAGGTC CAGCGATCCA GTGCAAGCTG TTGGAGGTTC TTGTTGGACT CACCAGTTGC CCAAAAACAG TTCCAAAAGT TGTTTATGCA ATTAAAACCT CCGGTGCAAT CATCAGTTTG GTTCAGTTTA TAGAGGTCCG AGAGAATGAT GATTTGCGTT TGGCTTCCAT AAAGCTTCTT CATAACCTTT CCCCATTCAT GAGTGAAGAA CTAGCTAAGG CCTTATGTGG CACTGCAGGA CAACTCGGAA GCCTTGTTGC AATCATTTCA GAAAAGACAC CAATCACTGA AGAACAGGCT GCAACTGCTG GGCTCTTAGC TGAATTGCCA GATAGGGATT TGGGTCTGAC TCAGGAGATG TTAGAAGTTG GTGCTTTTGA AAAAATCATC TCCAAAGTGA TTGGAATCCG CCAAGGGGAT ATCAAGGGAA TGAGGTTTGT GAGTCCTTTT CTGGAAGGAC TTGTGCGTAT ACTTGCTAGG ATTACTTTTG TTGTCAACAA AGAGGCTCGG GCCATTACCT TTTGCCGTGA GTACAATGTT GCTTCGCTCT TCCTTCATCT GCTTCAATCC AACGGTCAAG ATAACATCCA GATGGTTTCC GCCATGGCTT TAGAGAATCT TTCACTAGAG TCTATAAAGC TGACTAGGAT GCCTGATCCG CCTCCTCTGA ACTACTGTGG CTCGATCTTT TCATGTATGA GAAAACCACA CGTTGTAAAC GGGCTATGCA AGATCCACCA GGGAATATGT TCATTAAGAG AAACATTTTG CCTTGTCGAA GGAGAAGCTG TGGAGAAATT AGTGGCTCTA TTAGATCATG AAAATGAGAA AGTGGTTGAG GCCGCACTGG CAGCTCTTTC AAGCTTACTC GAAGACGGAC TAGATGTAGA GAAAGGGGTC AAGATACTTG ATGAAGCGGA GGGGATACCG CATATACTAA ACGTTCTGAG GGAGAACCGA ACAGAGAGGC TGACGAGGAG AGCGGTTTGG ATGGTGGAAA GGATCTTGCG GATTGAAGAC ATCGCAAGAG AGGTGGCAGA GGAACAGACC CTGAGCGCTG CACTTGTGGA CGCTTTCCAA AACGCTGATT TTAGAACGCG ACAGATCGCT GAGAACGCGT TGAAACACAT TGATAAGATC CCAAACTTCT CAGGTATATT CCCAAATATG GTCCCAAATA TGGCATAGGG GAATCTCTTT GAATCTGT |
| Length | 2458 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 8499873.. 8502728 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G20780.1 |
| Description | senescence-associated E3 ubiquitin ligase 1 |
| TAIR curator summary | Encodes a protein containing a U-box and an ARM domain. |
| Alias | [ATPUB44][PUB44][SAUL1][ARABIDOPSIS THALIANA PLANT U-BOX 44][PLANT U-BOX 44][senescence-associated E3 ubiquitin ligase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.05539 |
Ahg938122 | alpha/beta-Hydrolases superfamily protein |
| 10.8167 |
Ahg476019 | WPP domain-interacting protein 2 |
| 16 |
Ahg491086 | Protein kinase superfamily protein |
| 16.2481 |
Ahg471937 | Phosphoinositide phosphatase family protein |
| 19.799 |
Ahg928898 | syntaxin of plants 121 |
| 21.3307 |
Ahg494434 | RNI-like superfamily protein |
| 21.3542 |
Ahg926757 | Calmodulin binding protein-like |
| 22.0907 |
Ahg478870 | LRR and NB-ARC domains-containing disease resistance protein |
| 23.7697 |
Ahg487251 | ADR1-like 2 |
| 26.0768 |
Ahg495855 | Calmodulin-binding protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|