| Annotation |
|---|
| Description | jgi|Araly1|476019|fgenesh2_kg.2__1149__AT1G68910.1 |
| Sequence |
ATGGAGGAAA TCATTAGGGA GGATCATGGT GAAGCTTTGT CTAGTAGGAG TGAGGAGGAG CAAGAGATGT TGAGGATGTT GACAAAACTA GAAATAGACT CAGCTTATAC TAGTGAAAAG CTGCTGAACC TGCATGTTCT TCTTATGCAT CTTTTGGCAT GGGATAATGA TCTTGAAGGG ATGGGGACAC CTGATTCTTC TCCAGCATCC TTTGAAAAAG CTTTGGCGTT TGATCTGTTA TGCGGTATAT TGGAGTCGGA GTTAAAGGAG GTGGACGAGG TTTTGGATGT GTTGGAAGCC CAAATCGTTG ACACTTCTTA TAAGATATCA TCTTGCAAAC ATGCAAATTA TATCGTTGTC GAAGGCAAGT TGGGTGAATC TGCAGAATCC TTGAAGCAGT CTAGAGGACA AGTCTCAGAG ATCACTTTGC AATTAGCTCA GCTCCGAAGA ACACTTCATT ACATAAGAAA TGGAACAAGT GAAAACGAGG AGTCAGTGGA GTTAAGGCAG AAATATGCGC TGAAACCATC GGACTTAAGG CATAAAAATG CTTTGAGGAT GCTAGAGAAG TCATTGTCAA GAGAGCTAGA GCTTGAGAAG AAGTTAATGG AATTCCAGCA AAATGAAGAA CAATTGAAAC TCAAGCTACA CTACACAGAG GAGGTATCTT CTCGGATGGA AGAAGCATCA GAGTTTATAT GGGGACGGTT TCTAGAGGCA GATAATTCTT CAGAGGTGCT TACGGGTATT TCAAAAGAAC TTGTTGGTCG TCTACAGATT CTCCAGTTTA GTCTGAATGG GTCAGCCCAA CGGGAATCCG AACTTAAGTC TAAGCTTGAA GATTGCACTG TACAGCTCGA AACGAAAGAT CTTCTGGTGC AAAAGCTTGA GGGAACAATT GCAGAAAATA GTGAGATAGT TTCAGAAGTA CTCACTTTGA GGGAATATGT GAAGTCAGCT GAACAAAAAC TGAAAAATAC CGAGCTTGAG CTGAAAAGTG TCAACGCCTC CAAACAAGAA ATCCTGGTAC ATCTAGCTGA AATGGAAAAT GCAAATGAGT CGGTCAAAGA AAACCTTTTC GAGGCTGAAA GCAGAGCTGA GACTGGAGAA GCTAAGATTA AAGAGCTAAA TGCTGCAAAT CTTGAACTTA CTGAGGAACT AAATTTTCTC AAAGATGCTG ATGATAAAAA GACAAAGAAG GTGAACTCTC TCGAGAAGCA AGTCAGGGAA TTAGAAGTTC AAGTACAAAA CTCCAAGGTA TCATCAGAAG CAAGTCAAGA ACAGCAGAAC ATGTTGTATT CAGCAATATG GGACATGGAG ACCTTAATCG AAGATCTCAA GTCTAAAGCC TCAAAAGCCG AGAGTAGAAT GGAGACAGTG GAGGAGCAAT GCATTGTGCT TTCTACCACA AACTCTGAAC TCAACAAAGA CGTGACCTTT TTGAGGCAAA AAGCCAAATC CTTAGAAGCA TTGTTGGAAC TAGCTAACGA TGAGAAAGAG AGATATGCAC AAGAAATAAC TACACGGAAC AAGGTTTTGA TGGATATGAT GTTGCAATTA TCCAGTGAAA GGGAGCGTAT ACAAGAGCAG CTATATTCTT TGGCAAAGGA AAACAAAATA CTGAGAGTGA ATCAATGCTC AAATACATAC CAAAGAAATG GATCTTATGC TGGGGACAAA GAGCTGCAGT TACACACAGA CGGTCACGGA ATAGAGGCAC TGGCTGAAAG TCTGCAGAAG GATGAGAGAA CAAGGAAAGA ACCAGAGAAC CAGTCTGTGT CTGAAAAGAG TAGCACGTGC ACGGAGATCA GAAGGGCAAG CAACTTGAAA CACATACCAG TTTTGGCCTT AGTTTTTGTG CTGTTATGTT CATTCTTTGG TGTGACTTAT TAAGGAAATA TATCTTCAGT GAAAATGTCT TGGCAATAGC ATTCGCCATT TGTACATTGT GTTGTAAATA CTCATTTATC TTGTATTTAT TACAAGCAAT GTAT |
| Length | 1994 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 12659993.. 12662343 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G68910.1 |
| Description | WPP domain-interacting protein 2 |
| TAIR curator summary | Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells. |
| Alias | [WIT2][WPP domain-interacting protein 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.14143 |
Ahg920412 | Uncharacterised conserved protein UCP031088, alpha/beta hydrolase |
| 10.8167 |
Ahg921044 | senescence-associated E3 ubiquitin ligase 1 |
| 18.4391 |
Ahg919368 | |
| 26.6083 |
Ahg342288 | Mitochondrial substrate carrier family protein |
| 33.9411 |
Ahg491737 | villin 4 |
| 34.0441 |
Ahg494007 | Trypsin family protein with PDZ domain |
| 34.2053 |
Ahg475793 | suppressor of npr1-1 constitutive 4 |
| 36.6742 |
Ahg333105 | 3-ketoacyl-CoA synthase 20 |
| 36.8782 |
Ahg488680 | Chaperone DnaJ-domain superfamily protein |
| 38.833 |
Ahg929659 | Outer arm dynein light chain 1 protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|