Detail



ID : Ahg921161

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921161|scaffold_102442.1
Sequence
CCCGGTAACA GGGAGCTCGC ACGGGCGGCT ACGAAATCGC TGGATTTTCA AATCGTCTAT CAGTTTCCAT GACTTCAGAT GCTCTCACTA TACCGTCTGA GCTTGAATCT GCATTGCGGC TCAGAACTGT ACAATACTTT ATTACAAAAA GGCCTTGGCT TGATCTTTAT GGAGTCCATG TGAGGCCTGT GCCACCATTC GGAAGTACAA GCCGTAAACC CCATTATGAT CCAGCTTTGA TTCATCGTTG CTTGCCTGAT GAGCTTCTTT TCGAGGTGTT TGCTCGGATG ATGCCTTATG ACTTAGGTAG AGCAGCTTGT GTATGCAGAA AGTGGAGGTA CACGGTTCGG AACCCTGTGT TCTGGCGTAA TGCCTGCTTG AAAGCTTGGC AGACTGCTGG GGTTATCGAA AACTATAAGA TCTTGCAGTC TAAATATGAT GGATCATGGA GGAAAATGTG GCTTCTTAGA TCCAGAGTTC GTACTGATGG TCTATATGTG AGTAGGAATA CTTACATTCG AGCTGGAATT ACTGAGTGGA AGATTACAAA TCCAGTTCAC ATTGTTTGTT ACTTCCGCTA CATAAGGTTC TACCCTTCTG GCAGATTTCT TTACAAGAAC TCTTCACAGA AATTGAAGGA TGTTGCCAAG TACATGAACT TTAAGGCTTC TAAATCTGAC AGTCTTTACA GAGGCACTTA TACATTGTCA ATGTCGGATG ATAAGATTGA AGCAGCTGTT CTGTACCCAG GGACGCGCCC TACTGTCTTA AGGATCCGTT TAAGGTTAAG AGGAACAGCG GTTGGAGCGA ATAACCGGAT GGATTTGCTT TCACTAGTGA CAAGTGGTGT GAACGATGAG GAAATAAGCA GCACAGAAGA AGACATTCTT GGGGTAGTTG AAGGTTGGGA AGACGATGAA ACTCACAACC CGGATATACC TGCCGTCTCA CACAAGAGGG GTATGACTCC ATTCGTCTTC GTTCCTTTCG AAGAGGTTGA ACAATCGGTT CTGAACTTGC CACCGGAGAA AATGGATTAC TATGTCACTG GCTAAAAGAG ACACAGCGAC GTATCT 
Length1076
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8990697.. 8993232
Download Sequence
A.thaliana
AGI-codeAT1G21760.1
DescriptionF-box protein 7
TAIR curator summaryThis gene is predicted to encode an F-box protein that is evolutionarily conserved between Arabidopsis and other eukaryotes including S.cerevisiae and humans. It may play a role in regulating translation under conditions of temperature stress. FBP7 transcript levels are increased at high and low temperatures.
Alias[ATFBP7][FBP7][F-BOX PROTEIN 7][F-box protein 7]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg493944 mitogen-activated protein kinase kinase 3
4.89898 Ahg496018 Protein kinase superfamily protein
18 Ahg919501 exocyst subunit exo70 family protein H6
28.1425 Ahg472680 SIN3-like 3
28.9828 Ahg495109 ubiquitin-conjugating enzyme 33
31.6228 Ahg482806 chaperone protein dnaJ-related
33.7639 Ahg951350 acyl-CoA oxidase 2
35.8748 Ahg489410 SPOC domain / Transcription elongation factor S-II protein
37.4166 Ahg940928
37.5633 Ahg912607 nucleic acid binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression