| Annotation |
|---|
| Description | jgi|Araly1|472680|fgenesh2_kg.1__2634__AT1G24190.1 |
| Sequence |
TTTTGATGGT AATGAAGCTC TGTTCAACTT CAAACACCAT GGTTGGAGGA GGAAGTGCTC AGAAGCTAAC TACAAATGAC GCGCTTGCAT ACCTTAAAGC CGTGAAGGAT AAATTTCAGG ATCAACGTGA AAAATACGAC GAGTTTCTTG AGGTCATGAA GAATTTTAAG TCTCATCGAG TTGATACAGC TGGTGTGATA ACAAGAGTAA AAGAACTTTT CAAAGGGCAC CAAGAGTTAA TATTGGGTTT CAATACCTTC TTGCCAAAGG GTTTTGAGAT CACACTCCAA CCTGAAGATG GACAACCTCC ACTAAAGAAA CGCGTTGAGT TTGAGGAAGC AATTAGTTTT GTTAACAAGA TTAAGACAAG GTTTCAGGGC GACGATCGTG TATACAAATC ATTTTTAGAC ATTTTAAACA TGTACAGAAA GGATAGCAAG TCCATAACTG AAGTCTACCA GGAGGTTGCC GTCCTATTTC GGGATCATAC GGATTTGCTT GTAGAGTTTA CTCACTTTCT GCCTGATACT TCAGCAACAC CCTCTATTCA TTCTGTGAAA ACTTCAGCTC GCGACAGAGG GATGTCTCTG CCTGATAAGA AGGACCGGAT CATTACTCCA CATCCTGACC ATGACTATGG TACTGAACAT ATGGACCGGG AGAGACCTAT GAAGAAAGAA AATAAAGAAC ACATGAGAGG TAATAACAAC GAAAATGAGC AGAGGGATGC CAGAGATTTC GAACCTGATA GCAAAAAAGA GCAGTTTCTC AACAAGAAGC AGAAAATACA TATTAGAGGC GGTGATTTTG CTGAAATTTC CAATCAAGTC AGGGAAGGGA ATAAATTTTT TGGAGCGGTT CCTAGTTCAT CTACTTATGA TGAAAAAGGT GCCATGAAAA GTTACAGTCA AGATCTAGCT ATTGTCGATA GAGTAAAGGG AAAGCTTAAT GCATCCGAGT ACCAGGAGTT TTTACGTTGC CTTAATCTCT TTTCGAAAGA AATAATCAGC CGACCAGAAT TGCAATCTTT GGTAGGAAAT TTAATTGGAG TATATCCTGA CCTCATGGAT TCCTTTATAG AGTTTTTGGT GCAATGCGAA AAGACTGAAG GACTGCTCTC TGGTATTCTG ACTAAGAAAT CCTTGTGGAG TGAAGGCAAA TATCCTCAAC CATCACTGGA CAATGATAGA GACCAAGAAC ATAAGAGAGA TGACGGGTTT AGAGACAGAG ATCATGATAA GGAAAGGCTT GAAAAAGCAG CTGCAAATCT GAAATGGGCA AAGCCAATCA GTGAACTAGA TCTCTCGAAC TGTGAACAAT GCACTCCTAG TTATCGGTTA CTTCCAAAGA ATTACCCAAT TTCTATTGCA AGCCAGAAGA CAGAGCTCGG TAAACTGGTT CTTAACGATC ACTGGGTCTC CGTCACATCA GGAAGTGAAG ATTATTCATT TAGCCACATG CGCAAGAACC AGTATGAAGA GAGCCTCTTC AAATGTGAAG ATGACAGGTT TGAGCTAGAT ATGCTATTAG AGTCTGTGAA TTCAACTACA AAGCATGTGG AAGAATTACT GGCAAAGATT AACAGTAATG AACTGAAAAC CAACAGCCCC ATCCGTGTCG AGGATCACCT CACAGCTCTA AACCTAAGAT GCATAGAACG TTTATATGGT GATCACGGGC TCGATGTGAT GGATGTGTTA AAGAAGAACG TGTCTCTTGC ATTACCTGTT ATCCTAACAC GTTTGAAACA GAAGCAAGAA GAGTGGGCAA GGTGTCGTTC TGATTTTGAC AAAGTCTGGG CTGACATATA TGCTAAGAAT TACTACAAAT CGCTTGATCA TCGAAGTTTC TACTTCAAAC AGCAGGATTC GAAGAGTCTC AGCATGAAAG CTTTGTTGGC AGAGATAAAA GAGATCACTG AAAAGAAGCG AGAGGATGAT TCACTTCTTG CATTTGCAGC CGGAAATAGA CTATCCATTT CCCCAAATTT GGAGTTTGAT TATCCGGATC CTGACCTGCA TGAAGATCTC TACCAGCTGA TCAAATATTC TTGTGCAGAA ATGTGCTCTA CTGAACAGTT AGATAAGGTA ATGAAGATTT GGACAACCTT CGTGGAACAA ATATTTGGTG TTCCTTCTCG CCCTCAAGGT GCTGAAGACC AAGAAGACGT TGTCAAGTCC ATAAACCAGA ATGTAAAAAG CGGTAGTTCA AGTGCTGGCG AGAGCGAGGG AAGTCCTCAC AATTACGCTA GTGTTGCCGA CTCTAGACGC TCAAATACAT CTCAAAAAGC TAATGAACAT AATCAGTTGG GGCAACCTAG TAATTTGGTG AGGAATGGCG CTGCTGTTAG GATTTCAGAT GCCTTATGTG AGACTGCTCA GCATGAGAAA ATGCTGAAGA ATGTAGTTAC GTCTGGTGAA AGGCCTGAAA GCAAACAAGC TGTTTCTATT GAGCATGTAC ACGAATCAAC TGCTCTCGCT GTGGATGGAT TATTAGACCA AAGTAATGGA GGAAGCAGTA TAGTACACAT GACCGGGCAT AACAATAATA ATCTGAAGCC TGTGACCTGT GGAACAGAGT TGGAGTTGAA GATGGATGAT GGAAATGGGC CAAAATTAGA GGTTGGTAAC AAGAGATTAT TGTCAAATGG GATCTCGGTA GAAATAACAA GTAACCAAGA GTTGGCAGGG AATTCCAAAG TTGAAAGAGA AGAAGGTGAA CTTTCTCCCA ATGGAGACTT TGAGGAAGAT AATTTTGCAG TTTATGAAAA AACTGGTTTG GAGACCACCA GCAAAGCGAA TGATAATACT GGAAATAACA TTAGCGGAGA TAGAAGTAGA GAAGGGGAAC CATCTTGTCT GGAGACAGGG GCTGAGAATG ATGGTGAAGG TGTCGAAAAC GCCGCAAGAT CATCAGAGGA CAGCAGAAAT GCATATGAGA ACGGTGATGT TTCTGGAACG GAGTCTGGTG GTGGTGAAGG TCCGGAGGAT GATTTGGATC GCAATAGTAA GGGAGAAAGC GAATGCGAGG CTGAAGGTAT GGCTGATGCA CATGATGCTG AAGAAGATGG GTCTGCCTTA CCCTTTTCAG CACGATTCTT ACTGCATGTA AAGCCCTTAG CAAAGTATGT TCCTTCAACT ATAGCTTTGC ATGACAAGGA GAAAGACTCT CTGAAGAACT CCCAAGTCTT CTATGCAAAT GATTCATTTT ACGCGCTTTT CAGGCTGCAC CGAATATTGT ACGAGAGAAT ACTATCAGCA AAAGTTAACT CATCATCCCC GGAGGGAAAG TGGAGGACCT CAAATACCAA AAATCCTACT GATTCCTATG CCAGATTCAT GACTGCTCTC TACAACTTAC TTGATGGTAC ATCTGATAAT GCCAAGTTTG AAGATGACTG CCGAGCGATA ATCGGGACTC AGTCGTATAT TCTCTTCACA TTGGACAAAC TGATCCATAA ATTCATCAAG CATCTCCAAG GAGTAGCAGC TGATGAGATG GACAACAAAC TTCTGCAGCT TTATGCATAT GAGAAATCCA GAAGGCCTGA AACGATTTTT GATGCTGTTT ATTACGATAA TGCCCGTGTC CTTCTCCCTG ATGAGAATAT TTACCGTATT GAATGTAAAT TATCAACCCC AGCCAAACTC TCTATTCAGC TTATGTGCAA CGGCCTTGAA AAGCCCGATG TGACATCTGT ATCCATTGAC CCGACCTTTG CAGCTTACCT CCGCAATGAC TTCCTCTCCG TACAATCGAA TGCAAGGGAG GATCGTAGAA TCTATTTAAA TAGGAACAAG CGCAAAGTTT GTGGTAAAGA TGAACAGTTA TACAGCACAG ATGGAGTTAA GATTAAAAAT GGGTTGGAGT GTAAGATAGC CTGCGGTTCT TCAAAGGTCT CCTATGTATT AGAAACAGAA GATTTGTTGG TGCGAGTTAA AAAGAGAAGA AAAACTGTGC GCTACAATGA GCATTCTTGG GTATGGCAAA TGAGGTTACA ATGTTACCAA ACGAACTTCT TGTGACCAGA CTGTAACAAT CTGGAAGAAG GATACCAAAT CAACTCAACT TGTTCATTCA TTCATTCTCC AACTTAACAG AGACAAAAGT GGCAATTCTC CATTGTTGAC TTCACCGGAT AAAGCCAAAT TGCATTCTCT TTGTTCATGA GAAGAAAGCA ACAAAGGATT TGGCTTTTTG TTGTCTGTGA CAGAAAAATG TTGTTACATA TGTAAAGCTT GTCTTTTTCA CTCACTTTGT GTAAAGTTTT GTATGTT |
| Length | 4277 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 10202849.. 10209314 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G24190.1 |
| Description | SIN3-like 3 |
| TAIR curator summary | Enhances AtERF7-mediated transcriptional repression. RNAi lines show ABA hypersensitivity. Interacts with ERF7 and HDA19. |
| Alias | [ATSIN3][SIN3][SNL3][ARABIDOPSIS THALIANA SIN3 HOMOLOG][SIN3-like 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg484020 | DEA(D/H)-box RNA helicase family protein |
| 8.06226 |
Ahg924606 | Protein kinase protein with tetratricopeptide repeat domain |
| 9.69536 |
Ahg328336 | RING/U-box superfamily protein |
| 10.198 |
Ahg890655 | TOPLESS-related 2 |
| 12.6491 |
Ahg495719 | peroxin 5 |
| 13.2665 |
Ahg488055 | Ubiquitin-associated/translation elongation factor EF1B protein |
| 14.4914 |
Ahg924855 | Lung seven transmembrane receptor family protein |
| 14.6969 |
Ahg472312 | Calcium-binding EF hand family protein |
| 15.2971 |
Ahg939058 | eukaryotic translation initiation factor 4G |
| 19.6723 |
Ahg488339 | golgi alpha-mannosidase II |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|