Detail



ID : Ahg921480

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921480|scaffold_102761.1
Sequence
TCTTAAAGCA AATCGGAGAG ACTCCGGCGA TGGCGTTATC ACGACTTTCT TCGCGATCCA ACACTTTCTT AAAGCCGGCG ATCACCGCTT TGCCCTCCTC CATCCGCCGT CATGTTTCCA CAGATTCATC ACCGATCACA ATCGAAACCG CCGTCCCTTT CGCATCGCAT CTATGTGAAT CGCCGTCACG CTCCGTCGAG ACTTCATCGG AGGAGATCTT AGCGTTTTTC CGTGACATGG CTCGGATGAG GAGGATGGAG ATCGCAGCAG ATTCTCTCTA CAAGGCTAAG CTGATCCGTG GATTCTGCCA TTTGTACGAT GGTCAAGAGG CTTTAGCGGT GGGAATGGAA GCGGCGATTA CCAAAAAAGA TGCGATTATC ACATCGTATC GTGATCACTG TACTTTCATT GGTCGTGGTG GGAAGCTTGT TGATGCTTTC TCTGAGCTTA TGGGAAGAAA AACTGGTTGT TCTCATGGTA AAGGAGGATC TATGCATTTC TATAAGAAAG ATGCTTCCTT TTATGGTGGA CATGGGATTG TTGGTGCTCA GATTCCATTG GGATGTGGTT TGGCTTTTGC TCAGAAGTAT AATAAGGATG AGGCTGTGAC TTTTGCCTTG TATGGTGATG GTGCTGCGAA TCAAGGACAG TTGTTTGAGG CCTTGAATAT TTCGGCTTTA TGGGATTTGC CTGCGATTCT TGTTTGCGAG AATAACCATT ATGGAATGGG AACGGCTACA TGGAGATCGG CTAAGTCTCC GGCTTATTTC AAGCGTGGAG ATTATGTTCC TGGCTTGAAG GTGGATGGTA TGGATGCACT GGCTGTGAAA CAGGCGTGCA AGTTTGCCAA GGAGCATGCT CTCAAGAATG GACCTATTAT ACTTGAGATG GACACTTACA GATACCACGG TCACTCTATG TCTGACCCAG GAAGCACTTA CCGTACTCGT GATGAAATCT CTGGCGTGAG ACAGGTGCGT GATCCAATTG AAAGGGTGCG AAAGTTGCTC TTAACTCATG ACATAGCTAC AGAAAAAGAG CTTAAGGACA TGGAGAAAGA GATAAGGAAA GAAGTAGATG ACGCTGTAGC TCAGGCTAAG GAGAGCCCTG TACCAGATGC ATCTGAGCTA TTCACAAACA TGTACGTGAA AGACTGCGGA GTTGAGTCAT TTGGAGCAGA CAGAAAAGAA CTCAAAGTAA CACTTCCATA AATCATTGCT TCCCAAGGAG AT 
Length1232
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10199604.. 10202675
Download Sequence
A.thaliana
AGI-codeAT1G24180.1
DescriptionThiamin diphosphate-binding fold (THDP-binding) superfamily protein
TAIR curator summaryArabidopsis thaliana pyruvate dehydrogenase E1a-like subunit. 81% identical to a previously characterized Arabidopsis mitochondrial PDH E1a-subunit, At1g59900
Alias[IAR4][IAA-CONJUGATE-RESISTANT 4]
Gene coexpression
MR
MR Locus Description
19.8997 Ahg486610 Protein of unknown function (DUF3245)
23.6643 Ahg472822 ARM repeat superfamily protein
25.6905 Ahg471079 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
30.4302 Ahg355042 pleckstrin homology (PH) domain-containing protein
34.3802 Ahg489030 calmodulin 6
44.6654 Ahg912544 Protein of unknown function (DUF1664)
47.6235 Ahg485584 Dihydrolipoamide acetyltransferase, long form protein
47.7284 Ahg946399 SH3 domain-containing protein
48.621 Ahg921521 5'-AMP-activated protein kinase-related
50.3984 Ahg470771 Transcription factor IIA, alpha/beta subunit
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression