Detail



ID : Ahg472822

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472822|fgenesh2_kg.1__2776__AT1G25490.1
Sequence
AAAAATCAAA CGGAGAATAT TATTTTTCTC GCTCGCAATT CCTCTTTCTC ACCTTTTCTC GCCCATCGGA ATCTGAAGAA GCAGCTCTTC TACGACGCCT GGATCGTGAC TTGATTCGAA CTTTCACATA AGATGGCTAT GGTAGATGAA CCGTTGTATC CCATTGCTGT GCTCATAGAT GAGCTTAAGA ATGATGATAT TCAGCTTCGT TTGAACTCGA TCCGTCGCTT ATCTACTATA GCTCGTGCCC TTGGTGAGGA ACGCACAAGG AAGGAATTAA TCCCTTTTTT GAGTGAGAAT AGTGATGATG ACGACGAGGT GCTGCTTGCA ATGGCTGAGG AATTGGGAGT TTTTATTCCG TTTGTCGGAG GAATTGAGTA TGCGCATGTT CTTCTTCCTC CTTTGGAATC TCTCTGTACT GTTGAAGAGA CCTGTGTGAG AGAAAAAGCT GTGGAGTCGC TTTGTAAGAT CGGATCTCAA ATGAAAGAGA ATGATCTTGT TGAATCCTTT GTCCCTCTTG TGAAGAGACT AGCAGCTGGT GAATGGTTTG CAGCAAGAGT TTCTGCATGT GGTATATTTC ATGTTGCATA CCAAGGTTGC ACTGATGTGC TGAAGACAGA GTTACGGGCT ACTTATAGCC AGTTGTGCCA AGATGATATG CCTATGGTGC GAAGAGCTGC TGCATCTAAC CTGGGGAAAT TTGCTACAAC TGTCGAGTCT ACCTTTTTGA TTGCTGAGAT CATGACTATG TTCGATGATC TTACTAAAGA TGACCAAGAT TCTGTGAGAC TTTTGGCTGT GGAAGGGTGT GCAGCTCTTG GAAAGTTGCT GGAACCTCAG GATTGTGTTG CACGCATTTT ACCTGTTATT GTTAATTTCT CTCAGGATAA ATCTTGGAGG GTGCGCTACA TGGTTGCTAA TCAGCTATAT GAACTTTGTG AGGCAGTGGG TCCTGATTGC ACGAGGACGG ATTTGGTTCC AGCATATGTG AGATTGCTAA GGGACAATGA GGCTGAAGTG CGAATAGCAG CAGCGGGAAA AGTGACCAAG TTCTGTCGGC TTTTGAATCC AGAGCTTGCG ATTCAGCACA TCCTTCCTTG TGTGAAGGAA TTATCATCTG ATTCTTCTCA ACATGTCCGC TCTGCTCTAG CTTCAGTAAT AATGGGAATG GCTCCTATCC TTGGGAAGGA CTCAACCATT GAGCATCTGT TACCAATTTT TCTTTCCCTT CTGAAAGATG AATTTCCTGA TGTGCGCCTC AACATCATAA GCAAGCTAGA TCAAGTCAAC CAGGTTATTG GAATTGATCT ACTGTCTCAA TCCTTGTTAC CGGCCATTGT AGAGCTTGCT GAGGATCGGC ACTGGAGAGT CCGACTTGCG ATAATAGAGT ATGTTCCTCT GTTGGCCAGC CAGTTAGGTA TAGGATTTTT CGATGACAAG CTTGGAGCCC TTTGCATGCA ATGGCTGCAA GACAAGGTCT ACTCTATCCG TGAAGCTGCA GCAAACAACC TAAAGCGCCT TGCAGAGGAG TTTGGTCCTG AATGGGCAAT GCAGCACTTA GTTCCCCAGG TATTGGACAT GGTCAACAAT CCACACTACC TACATAGGAT GATGGTTCTA CGTGCAATAT CTCTCATGGC TCCTGTAATG GGATCAGAAA TCACATGCTC TAAGTTTCTT CCTGTGGTCG TTGAAGCATC GAAAGACAGA GTTCCAAACA TCAAGTTCAA TGTTGCAAAA CTTCTGCAAT CCCTCATCCC CATAGTCGAC CAATCAGTGG TGGACAAAAC AATCCGTCAG TGTTTGGTAG ACCTTAGCGA AGACCCTGAT GTTGATGTTC GCTATTTTGC AAACCAAGCG CTTAATTCCA TCGATGGTAC CACAGCAGCA CAATCCTGAA TTGATTTTAT TTCATATGTA TGATCGTTAA GTTAAGTTTC TTATTCGTGT TCTTTCTGCA GTTTATTTGG TTTGTTTCGT GTAAAACGCC ATTTTGGTTG CTGGCTATGA ACTGCAACTA TATTTGTTAG TAAAATTGTA TTCCCTTTCT TACATTTTCT ATTGTTCCAA GCTTTATACA TTCTTCTTAG TTTACTAATG CTAACACT 
Length2108
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10987478.. 10991434
Download Sequence
A.thaliana
AGI-codeAT1G25490.1
DescriptionARM repeat superfamily protein
TAIR curator summaryOne of three genes encoding phosphoprotein phosphatase 2A regulatory subunit A; Recessive ethylene-response mutant EER1 displays increased ethylene sensitivity in the hypocotyl and stem
Alias[ATB BETA BETA][EER1][RCN1][REGA][ENHANCED ETHYLENE RESPONSE 1][ROOTS CURL IN NPA]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg951336 cyclin dependent kinase group C2
10.7238 Ahg940006 RP non-ATPase subunit 8A
23.6643 Ahg921480 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein
28.0357 Ahg921765 nuclear transport factor 2A
30.8058 Ahg931790 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative
31.749 Ahg922244
31.749 Ahg487928 Histone superfamily protein
34.4674 Ahg470466 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
36.8239 Ahg349013 Integral membrane HRF1 family protein
37.7889 Ahg478852 STRUBBELIG-receptor family 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression