Detail



ID : Ahg921729

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921729|scaffold_103010.1
Sequence
GAGTCGACAC TGCAAATGAG ATGGTGGTGA AGAAAATGAG ATCCGGTGAC AACGACGATG ACAACGACGG TTTGAGCGTA GGGGAACGAC AAAATTCAGA CCCTCGCTCC GCCCTTCCAC CTCCACCTTC CTCCGCCTCT TCTCCGCCGA CCCAAATCCA CGCCCCTCCC GGTCAGCTAC CTCACCCCCA TGGCAGGAAG AGGGCCGTGA TCTATGGTAT CGTTTCTCTC ACCACGAGCT CAAAGGCTGC ATCAACGACG CCAAGTGCAT GCGTCACCTT CTCATCAACA AATTCAAGTT CTCCCCAGAT TCAATTCTCA TCTATTCAAC CAATCTCTCT CTCTCTCTCT CCGTGAGTTT TGCTTTGTCA AGGGAG 
Length376
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9486921.. 9487312
Download Sequence
A.thaliana
AGI-codeAT1G02170.1
Descriptionmetacaspase 1
TAIR curator summaryMetacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain
Alias[ATMC1][AtMCP1b][ATMCPB1][LOL3][MC1][MCP1b][ARABIDOPSIS THALIANA METACASPASE 1][metacaspase 1b][ARABIDOPSIS THALIANA METACASPASE 1B][LSD ONE LIKE 3][metacaspase 1]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg928241 Ribosomal protein L34e superfamily protein
38.1445 Ahg921443 trehalose-phosphatase/synthase 9
42.5323 Ahg918823 Protein of unknown function (DUF3133)
49.2037 Ahg921879 VQ motif-containing protein
53.1037 Ahg478870 LRR and NB-ARC domains-containing disease resistance protein
54.4151 Ahg923776
60.0833 Ahg910228
63.2456 Ahg948569 Trypsin family protein
80.0999 Ahg944602 ADR1-like 1
83.4985 Ahg495970
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression