Detail



ID : Ahg918823

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918823|scaffold_100104.1
Sequence
TCTTCGTCGG AGATTTTTCT TTTTCCGATG AGGACAAGCG GTGACGTTTA TGGAGCAGAT GCTGGTTCTT CAAGAAGTGA TGAAGATAGA GGGTTTAAGG AGGATCTCAA TGAACCCGCT AGCCCGATGA GAAATCGCCA GGAAGATTCG AATTCACGAC CTGGGTCTCA GAGATTCGTC AAGAGCTTGA GAAAAGAAGA AGAGACTGAT TCAGATTCTT CTTCTTCTAA GACCAGAAAC AACCCAATTC AGTACACAGA TAAACAACAA GCCGAGCTTT TGAGAAAGCT TGATTCTATT AAAGATCATC TTCTCCGTGG TGGAGGTAAT GCTAATGTGG CTGATCAGCC ACCACCACCA ATGGGTTTCC ATGGTCATGG TCCTCCTTCT TATTACAATC CATACCCTGA GCCGTTTCCT TATGGAATGT ATCCTACCGC GAGTAACCCG ACTCATGTTC CAGCTTATAG AGACCCTTAT GGATTCCCAG TGCATAGAGT ACCTCAAAAC TTTTATCAAG GACCAGGTCA TTACCCGAAT CAGATGCCGC CTCGTCCTCC ATATCCTCAA GGACAGTATG TAGACATTGG TTCTGATATA CTTGACACCC AGTTACAGGA CCCTAGATTC TTTCCGGGTA CGCCGAGTAG GTACGGTGAT GTCCCATTTA GCCCGGCTAA GCACCACGGT GAGAAAGTTG GACCCTTTAG TCCACATGGT GGTGTTCAAG GTCATCACAC GAGGTGGCCT AGTGATATTG ATTCTGAAAT GGGTGGTGCT TTTGCTCGTG GGTATGTTCA AAAAGCTGTT TCGGATACTG ATTCACGTCG TTGCCATCCT CTATCAGGCG GTGCGCCTTT TATTGCTTGT CACAATTGCT TTGAGCTGCT CTATGTGCCT AAGAAGAAGC TTCTTGGTCA GGAAAGGCAA CAAAAGCTGC AATGTGGTGC TTGTTCTGAG GTTATCAGTT TCACAGTTGT TGATAGGAAG CTTGTTTTCT CCTCTTCTGC CCTGGGGGAA ACTACGAACC GGGTTTCTGT AGAGGTTGAA GATAGAAGCG CACCAAGCGC TGTGGTAGAT GATTATCCAC TTAAGGATGA GGAAATAAGA ATACACCAGG AAACGAAAAT TGTACATGCT GTATCGCCTA GTGAACACTC AGACGACGAA GACAGGTCAA GCATTTCTAG TAGGCCGCAG AAACAGGTCG TCAAGTCTGT TCGCAGCAGA GCCCAAGGCG CAAAGGTTTC TCCTCCTCCT CCTCCTCCTG AAAAGTCCAA TCTTCTTGAG CTCTTTGAGT ATTCTAATGT AAACCGAGCT GCAATCACTT ACGGAATGGC GCAGCTAGGG TACAATAAGC AAGAATCCTA CAGGAAACAA GACTCGCTAA AATCAGAATC AGTAGCTACT GAGACAGATG TTTCTTATAA TGAATACTAT AATAACACTG AGGAGTCTGA AGATTCAAGG ATCTCAAAAG CCAACAAAGA AGAGAGAAGA CCAAGAAACC GAAAGCAGAG TAGTGAGTAC AGTTTCCCAG AGGTCACAAA TAAAATCGGC TCTAACGACC AAAACGACGA GCAGTTAGAG GTTTGGGTGA ACGGGCATCT GATACCGGAA GATCTGGTTA TCAGCGCTGA GAAACAAGCT GGACCAGTTC AAGCTGGCAA ATACTGGTAT GATTACCGTG CTGGGTTCTG GGGAGTGATG GGAAACCCGT GTCTCGGTAT AATACCACCA TTTATCGAAG AGTTTAGTCG CCCAATGCCG GATAACTGCG GTGCAGGAAA CACGAGCGTG TTTGTAAACG GAAGAGAGCT TCACGAGAGA GATCTAGAGT TACTTTCAAG AAGAGGTCTT CCTGGAGGCA AGAATCGTTC TTACATCATT GATATATCAG GAAGAGTTCT TGATGGAGAC TCTGGTGAAG AACTTAAGAG CCTTGGCAGA TTAGCTCCAA CGGTTGACAA GGTTAAGCAT GGATTTGGCA TGAGAGTTCC AAGATCATTA GTTTCATGAA GCTTCATCAG CTTGATTCC 
Length2039
Protein Sequence
Protein Residue
Map Locationscaffold_1: 304665.. 306953
Download Sequence
A.thaliana
AGI-codeAT1G01440.1
DescriptionProtein of unknown function (DUF3133)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.245 Ahg487366 sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors
7.93725 Ahg925208 binding
24.4949 Ahg923615 ARM repeat superfamily protein
25.6905 Ahg917653 type one serine/threonine protein phosphatase 2
28.9828 Ahg481718 Argonaute family protein
31.225 Ahg343537 SNF2 domain-containing protein / helicase domain-containing protein
31.3688 Ahg319227 valyl-tRNA synthetase / valine--tRNA ligase (VALRS)
31.4643 Ahg925040 Potassium transporter family protein
34.6987 Ahg490122 PCF11P-similar protein 4
39.8999 Ahg472692 Actin cross-linking protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression