Detail



ID : Ahg922988

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|922988|scaffold_104269.1
Sequence
ACAAATGTGG AGCTGTTTTG ATGTTTGACA TGGCACAGAT TAGCGGTCTT GTCGCTGCCA AGGAAAGTCC AAATCCATTC GATTATTGTG ATATTGTTAC CTCAACAACA CACAAGTCTC TCCGTGGACC TAGGGGCGGC ATCATATTTT ACAGGAGAGG CTTGAAGCCC AAGAAGCAAA GCATGAATCT TAATCACTGT GAGAGCAATA TCCAGTATGA TTTTGAAGAA AAAATCAACT TTTCTGTCTT TCCATCGTTG CAAGGCTTGC ACTGAAAACC ACGAGGAATC ACATT 
Length295
Protein Sequence
Protein Residue
Map Locationscaffold_1: 22387686.. 22388146
Download Sequence
A.thaliana
AGI-codeAT1G22020.1
Descriptionserine hydroxymethyltransferase 6
TAIR curator summaryEncodes a putative serine hydroxymethyltransferase.
Alias[SHM6][serine hydroxymethyltransferase 6]
Gene coexpression
MR
MR Locus Description
32.7261 Ahg311464 Cysteine proteinases superfamily protein
45.9891 Ahg943770 RNAligase
48.621 Ahg925876 Protein of unknown function (DUF1162)
57.7668 Ahg482026 OSBP(oxysterol binding protein)-related protein 1A
74.3236 Ahg476896
78.4857 Ahg927133 transcription coactivators
79.8624 Ahg480961 Protein of unknown function (DUF803)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression