Detail



ID : Ahg925876

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925876|scaffold_201437.1
Sequence
CTCGGGGAAT GGTTTTAGCA ATGGCTTGGA CATGTTGTTT CTCTATCATT GTGCATTCGG CTGCCAGGAA TCAGAGGAAT CCTTTTGGGA GTTGGGCAAC ATCACCATCA GGGGAGCGTA TCTTTCTCGG GGAGAGTCTT CTTGCAAGTG TACTACTTGC TTGGCATGCA TCTCTGGCTG GTGACCAAGT ATTTTCCCTG TTCAAAACTC CGGTTCCTGA TGTTGGAACT TCAGAATCTT CTGCTAGCAT ATTAAAAGGC ATGCACGGCT TGGTTATAAT GGGAGCTGTT TTCGTGGAAA ATACTGATCC TGACAAGAAT CTACCCCGTG ATGAGCAGGG GATTACTCCT TTGCTGCTCA AAATAAGAAA ATCAGGCAAG GAGGATCGGT TTGCAGAATT CTTATATTTC CACTGTGTAG TGGCGGCTCC TTTTGTTTTT CCGTATAGAA TGGGGATCAT GGCGATACGA GGAACTCAAC CTAAGCTTTT ACCCTTTTGC GGTAGGCGTT TTTCAAACAG AAGGTTACAG TTTATTGCAA GAAATGATAG TGTGAACTGT CACCCGACAT GCTCATTTGG TGCAGGATCT ACCGATTTGA CATATTCGGC CACCATCTCC CTTGGTCTAA TCATATGCCC ATTTATGCTG GATCAGTTCT ATTGGGCAGA AAAGATGTCT TGGCTTGGTG TTGCTCCTCA ACCATTGAAA AGATACCACC TGCTTCTGGA GGAAACAAAT GATGAGAACA TCATGGAAGC TTGGATTTCA GATGTGGTTG AGAAAAGAGA GTTTGCTGGT AAGAAGGCTA AGCTTGCTGC TGCAGAATTG GCAAAATTAT CCAGGCGTAT CTTTGATAGT CCAGCAGGGA ATCCTTTTAG TATGTCATAT ATTGCAGCCA AGGTGGAAGC TACTCTGTCT GTGATCAATG TGCATTTCTC TCCGTCGATA TTTGAAGGAA TCATGTCTGT GATTGAATGT CTTGATACTC AGGATCATGG AGATCGAAAT GCTCCAATTG ACCCCGTTCC CATCTTTCGT TTCACCGTCG ATACCAACTT GGTACTTTTC AGGTTGCACG TCAACCTTGA AAATGAAGGA GAAAATAGCA CAGTGCTTGT TCTTTCTATT CAACAGCTGG ATCTCTGGTA TTCACTTACC AAAGTTGAAG AGTGGTCGGT CCGTGTGAAA ACATTGGAAA TAAAAGCTTG CTCCTCTAAA GATGCAGACG GTCATATTTT GTGTTCATCT GGGAATCTAC TGAAATCGTA CTCTGCCTAT GGACAGGGGA TGGATGCTCA TAATATCCGG GGGTTGATAC TTTCAGGAAA CATGAGTACA AAAGTCCAGA TAAGAGATGT GTCTCTTCTT ATATCAGATG GAAGGTGGGG ATGTAGCGGT CTGCTTCTTG AAGTTCTTAT GAGAAACTTT CTGCTGCAAG CTAATCTGAC CGCGAAGAAG GAGGAGAGTT TGGTTTCATG TGATCTTGAA GTGAATTATA AAATATGCAC AAGAGCTCTA TACCAGTGGT TGCATCAGAA TATGGAAGCA GTTGTGTTGA TGTATGATGA TCGCTTTGAC CTCTACATTC TTCAAACTCA GGTTATCAAC AATGTTCATG TCATATTTCG TTTCTAAATA ATAAACTGGA TATCTAA 
Length1657
Protein Sequence
Protein Residue
Map Locationscaffold_2: 11032062.. 11040693
Download Sequence
A.thaliana
AGI-codeAT5G24740.1
DescriptionProtein of unknown function (DUF1162)
TAIR curator summary
Alias[SHBY][SHRUBBY]
Gene coexpression
MR
MR Locus Description
1 Ahg908179
3.16228 Ahg311464 Cysteine proteinases superfamily protein
5.2915 Ahg470343 Cystatin/monellin superfamily protein
7.34847 Ahg942832
11.9583 Ahg923205 ATP binding microtubule motor family protein
14.1421 Ahg936168
14.2829 Ahg929239 glucan synthase-like 4
17.5499 Ahg928599
20.9284 Ahg923921
23.2379 Ahg941585 anaphase-promoting complex subunit 8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression