| Annotation |
|---|
| Description | jgi|Araly1|923004|scaffold_104285.1 |
| Sequence |
TTCTCAACTT CCACTTCACT ATGTCCCTTT TTCATGTTTT CAGACTCTCT CTCACTTCTC TCTCCAATTC TCTCATCAAT CTCCGCAAAC TGTTCTCATT CATCTCTAGC CCCAATCTGA TAATCAAATC CATCTTTCAA TCTCTCACAC GGAGAAGTCC CAAACCTTCC TCTACGACGG CGGCGCTTCC ACCGTGCTCT TCCTCCTCCT CCGCCGCCGA CGCTTCAACT GAGGTTCGTC GGAACCGCTA CAAAGTAGCG GTGGATGCAG AAGAAGGAAG ACGGAGGAGA GAGGACAACA TGGTTGAGAA AAGTAAGCGT GAAGAAAGCT TACTTTTAGA ATTGGAGAGT TTGCCTTCAA TGGTTGGTGG TGTTTGGTCA GATGATAGAA GTTTACAGCT TGAAGCAACT ACTCAGTTCC GGAAGTTGCT TTCTATTGAG CGTAGTCCTC CGATTGAAGA GGTGATTCAA GCTGGTGTTG TGCCTCGGTT TGTGGAATTT CTCACGAGAG AGGATTATCC ACAGCTTCAG TTTGAGGCTG CTTGGGCATT GACGAACATT GCTTCTGGGA CTTCAGAGAA CACAAAGGTG GTCATTGAAC ATGGTGCTGT TCCGATTTTT GTTCAACTCT TGGCTTCTTA GAGTGATGAT GTTCGTGAGC AGCTAATATA TGTGTCTATG GTTGGTGACC AGTCATCGCA AAATCGATGC ACTTGCTTTA ACGACAACAA TGATAGCTCT TTCGACAATG AAGTATGTTT GGAGCTGATT CCAGCAACGG TTGATCTCGA AAGCTATGTT ATGTGGGAGA TGGTGATGGC GATCAAGTCA ATTTTTATTG AAGATATTAG TTCATTAATG ATATTTCTAT AGATGGTCAA AACTATATTT TGT |
| Length | 893 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 22501863.. 22503208 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G16143.1 |
| Description | importin alpha isoform 2 |
| TAIR curator summary | Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. |
| Alias | [IMPA-2][importin alpha isoform 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 22.2261 |
Ahg919141 | Major facilitator superfamily protein |
| 24.9199 |
Ahg495811 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 35.3553 |
Ahg473598 | Protein of unknown function (DUF803) |
| 52.2303 |
Ahg316716 | Transducin/WD40 repeat-like superfamily protein |
| 55.6417 |
Ahg489834 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 57.576 |
Ahg490624 | farnesylated protein 6 |
| 73.3621 |
Ahg927449 | Isocitrate/isopropylmalate dehydrogenase family protein |
| 82.9216 |
Ahg491117 | tonoplast monosaccharide transporter2 |
| 84.2081 |
Ahg925797 | myb domain protein 90 |
| 84.2615 |
Ahg356828 | cold regulated gene 27 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|