Detail



ID : Ahg923183

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923183|scaffold_104464.1
Sequence
TCTTCTTCTG AATCGTCACA ATGCGAGACT TCTTCCCCAA CTCGTCCATG GCGATTCTCT CTGTTTTCCT CTCACTCCTT CTCCTCTCTC TCCCTCTTCC ATCAACACAA GATCTCAACG CCGACAGAGC AGCTCTCCTC TCTCTCCGCT CCGCCGTCGG CGGCCGTACA TTTCGCTGGA ACATCAAACA AACCTCACCG TGTAACTGGG CCGGTGTCAA ATGCGAGAGT AACAGAGTCA CAGCCCTCCG TCTACCCGGC GTTTCTCTCT CCGGTGACAT TCCAGAGGGT ATTTTCGGTA ACTTAACTCA GCTCCGTACA CTCAGCCTCC GTCTCAATGC TCTCTCTGGC TCACTCCCTA AAGATCTCAG TACCTCTTCC AGTCTCCGGC ATCTTTACTT GCAAGGAAAC AGATTCTCCG GCGAGATACC TGAAGTTTTA TTCAGCCTTA CTCACCTCGT GAGGCTTAAC CTCGCTTCCA ATAGTTTCAC CGGCGAAATC TCTTCAGGTT TCACGAACCT CAGGAAGCTA AAGACTCTGT TTTTAGAGAA TAATCAACTC TCTGGTTCAA TCCCTGACTT AGATTTACCT TTGGTTCAAT TCAATGTTTC GAATAACTCG TTGAACGGAT CTATACCTAA GAGTCTTCAG AAGTTTGAGT CTGATTCGTT TCTACAGACT TCACTTTGTG GCAAACCGCT TAAACTTTGT CCTAATGAAG AAACTGTACC GAGTCAGCCT ACTTCTGGTG GAAACAGAAC ACCACCGAGT GTTGAGGAAA GTAAGGAGAA GAAGAAAAAG AACAAACTTT CCGGTGGAGC TATTGCCGGA ATTGTGATCG GATGTGTGGT TGGTTTTGCT TTGATTGTTT TGATATTAAT GGTGCTCTGT AGGAAAAAGG GTAATGAGAG ATCAAGAGCT GTTGATATCT CAACAATCAA ACAGCAAGAA ACCGAAATTC CCGGAGATAA AGAAGCGGTG GATAATGGAA ATGTGTATTC GGTGAGTGCT GCTGCAGCTG CGGCGATGAC TGGAAACGGA AAAGCTAGTG AAGGGAACGG TCCAGCGACG AAGAAGCTTG TGTTCTTTGG TAATGCGACT AAGGTTTTCG ATCTTGAAGA CTTGTTGAGA GCTTCTGCGG AGGTTCTTGG GAAAGGAACG TTTGGGACGG CGTATAAGGC GGTGCTTGAC GCGGTGACGG TTGTGGCTGT GAAGAGGCTG AAGGATGTAA TGATGGCTGA TAAAGAGTTT AAGGAGAAGA TTGAATTGGT TGGTGCGATG GATCATGAGA ACTTGGTGCC ATTGAGAGCT TACTATTTCA GCAGAGACGA GAAACTTCTT GTCTACGACT TCATGCCTAT GGGAAGCTTA TCAGCTCTCT TACATGGAAA CAGAGGAGCG GGAAGGAGTC CACTAAACTG GGATGTTAGA TCACGAATTG CTATTGGTGC AGGTCGTGGT TTAGCCTACC TTCACTCACA AGGCACTTCG ACATCTCACG GCAACATCAA GTCCTCAAAC ATCCTCTTAA CGAAATCCCA CGACGCTAAA GTCTCAGACT TTGGCTTAGC TCAGCTCGTG GGATCATCTG CAACAAATCC AAACCGCGCT ACGGGTTACC GTGCACCAGA AGTAACTGAT CCGAAACGCG TGTCGCAGAA GGGTGACGTG TACAGTTTCG GAGTGGTGTT GCTTGAGCTG ATCACGGGTA AAGCTCCTTC GAACTCGGTG ATGAACGAGG AAGGAGTGGA TTTGCCCAGA TGGGTTAAAT CGGTGGCGAG AGATGAGTGG AGAAGAGAGG TTTTTGACTC GGAGTTGCTT AGTTTGGCGA CGGAGGAAGA AGAGACGATG GCGGAGATGG TGCAGCTAGG GCTTGAGTGT ACGTCACAGC ATCCGGACAA GAGGCCGGAG ATGTCGGAAG TGGTTAGGAA GATGGAGAAT TTGCGACCTT ATTCTGGGTC AGACCAAGTG GACGAAGCTG ATTAAGTCAA AGATTGTTAA TTGTT 
Length2005
Protein Sequence
Protein Residue
Map Locationscaffold_1: 23526522.. 23528852
Download Sequence
A.thaliana
AGI-codeAT1G48480.1
Descriptionreceptor-like kinase 1
TAIR curator summaryArabidopsis thaliana receptor-like protein kinase (RKL1) gene
Alias[RKL1][receptor-like kinase 1]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg893513
6.245 Ahg486504 Protein of unknown function (DUF630 and DUF632)
6.9282 Ahg935562 cytochrome P450, family 86, subfamily A, polypeptide 8
9.11043 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
9.16515 Ahg948737 HAD superfamily, subfamily IIIB acid phosphatase
10 Ahg945946 SKU5 similar 4
11.3137 Ahg486262 Basic-leucine zipper (bZIP) transcription factor family protein
14.0712 Ahg496502 Pectin lyase-like superfamily protein
14.4914 Ahg471076 Eukaryotic aspartyl protease family protein
15.0997 Ahg475879 Pectate lyase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression