Detail


ID : Ahg923403

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923403|scaffold_104684.1
Sequence
TTTAGAGTGA TTTCTTGAAA AATGGCTCAG ATTCAGCATC AGGGTCAGAA TGCCAATGGT GGAGTAGCTG TTCCCGGTGC TGCTGCGGCG GCTGGAGCTG CGGCGGCGGC TGCCGGAGCG GCGCAGCAAG GGACGACGTC TTTGTATGTC GGCGATCTGG ATGCGACAGT GACGGATTCA CAGCTGTTTG AGGCGTTTAG CCAAGCGGGT CAGGTGGTTT CTGTTCGTGT CTGCAGAGAC ATGACGACTC GGAGATCTCT TGGTTACGGC TACGTTAACT ATGCCACTCC TCAAGATGCT TCCAGGGCAC TGAATGAGCT GAATTTCATG GCTCTCAATG GAAGGGCTAT AAGAGTTATG TATTCTGTTC GTGATCCAAG TCTCCGTAAG AGCGGAGTTG GTAATATATT TATTAAGAAT CTTGACAAAT CGATTGATCA CAAAGCACTC CACGAGACAT TTTCAGCCTT TGGTCCCATT CTATCTTGCA AAGTGGCTGT TGATCCCTCT GGTCAGTCGA AAGGCTATGG GTTTGTGCAG TACGACACTG ATGAAGCAGC TCAGAGAGCC ATTGATAAAC TGAATGGAAT GCTTCTTAAC GATAAGCAAG TATATGTTGG ACCTTTTGTT CACAAGCTGC AGAGAGATCC TTCGGGTGAG AAAGTGAAGT TCACTAATGT TTATGTCAAA AACCTCTCCG AGTCCTTGAG TGATGAAGAG CTGAACAAAG TTTTTGGGGA GTTCGGAGTG ACTACTAGTT GTGTTATCAT GAGAGATGGT GAAGGCAAGT CTAAAGGCTT TGGATTTGTT AATTTTGAGA ATTCGGATGA TGCAGCCAGA GCGGTTGACG CTCTAAATGG AAAGACCTTT GACGACAAGG AGTGGTTTGT TGGGAAAGCC CAAAAGAAGT CCGAGAGGGA AACTGAACTC AAACAAAAGT TTGAGCAAAG TTTGAAGGAG GCTGCAGACA AGTCTCAGGG GTCGAACTTG TATGTTAAGA ACTTGGATGA GAGCGTCACA GATGATAAGC TTAGAGAACA TTTTGCTCCC TTTGGAACGA TTACATCATG CAAGGTGATG CGTGACCCCA CTGGAGTGAG TAGAGGATCT GGGTTTGTCG CATTTTCAAC TCCTGAGGAA GCATCTAGAG CTATTACGGA GATGAATGGA AAAATGATTG TTACCAAACC TCTATATGTT GCTCTTGCGC AGCGGAAAGA AGACCGCAAA GCTAGGTTAC AGGCTCAATT TTCACAGATG AGGCCGGTCA ATATGCCACC TGCGGTTGGT CCTAGGATGC AAATGTATCC ACCAGGTGGT CCACCAATGG GTCAGCAACT CTTCTATGGT CAAGGACCTC CTGCTATGAT TCCTCCTCAG CCTGGATTCG GATATCAACA ACAGCTTGTA CCGGGTATGA GACCTGGTGG GTCTCCAATG CCAAACTTCT TCATGCCTAT GATGCAACAA GGCCAACAAC AACAACAGCA GCAGCAACAG CAGCAGCAGC AGCGACCTGG TGGTGGTAGA AGAGGAGGAG CTCTTCCACA ACCGCAACAA CCTTCTCCTA TGATGCAGCA GCAGATGCAT CCAAGAGGTC GGATGTATCG GTATCCTCAG CGAGATGTAA ACACAATGCC TGGTCTTACT CCAAACATGC TTTCTGTTCC ATATGACGTG TCAAGTGGTG GTGGTGTGCA TCATCGTGAC TCGCCTGCTT CTCAATCTGT TCCTATTGGA GCTTTGGCTA CACAACTTGC AAACGCAGCT CCAGAGCAAC AGAGAACGAT GCTTGGTGAG AATCTATACC CGCTTGTGGA GCAGCTGGAG CCAGAATCCG CAGCTAAAGT CACGGGAATG CTTCTTGAAA TGGACCAAAC CGAAGTACTT CACTTGCTGG AATCACCTGA GGCACTTAAA GCTAAAGTTA CAGAAGCAAT GGATGTTTTG AGGAGTGTAG CACAGCAGCA AGCTGGTGGT GCAGCTGATC AGTTAGCTTC TCTGTCTCTT GGAGACAACA TCGTACCTTG AGAGTTCTAA GTTATATCTG A
Length2051
Protein Sequence
Protein Residue
Map Locationscaffold_1: 24677843.. 24680916
Download Sequence
A.thaliana
AGI-codeAT1G49760.1
Descriptionpoly(A) binding protein 8
TAIR curator summarypolyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family.
Alias[PAB8][PABP8][poly(A) binding protein 8][POLY(A) BINDING PROTEIN 8]
Gene coexpression
MR
MR Locus Description
9.69536 Ahg496177 GTP binding Elongation factor Tu family protein
9.69536 Ahg339926 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
11.6189 Ahg920787 Ribosomal protein L6 family protein
11.9583 Ahg942428 Ribosomal protein S24e family protein
14 Ahg473757 ribosomal protein 1
14.2127 Ahg476296
15.3297 Ahg487072 Ribosomal protein S12/S23 family protein
15.7797 Ahg929286 TCP family transcription factor 4
16.3095 Ahg495984 Plant protein of unknown function (DUF828)
16.9706 Ahg353746 Initiation factor eIF-4 gamma, MA3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression