Detail


ID : Ahg923494

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923494|scaffold_104775.1
Sequence
TTCGATTAAG AAAGCGAAAG TGATGGCCGC CGTAAATGGG TATCAGGGAA ATACTCCGGC AGATCCTCCG GCGTCTAATG GATCTAAACA ACCTGCCGCT CCGACCAAGA CTGTTGACAG CCAATCTGTT CTCAAAAGGC TGCAATCTGA ATTGATGGGC TTGATGATGG GCGGTGGTCC AGGAATATCG GCTTTCCCTG AGGAAGACAA CATATTCTGC TGGAAAGGGA CAATAACAGG AAGCAAAGAT ACTGTGTTTG AAGGAACTGA GTACAGACTC TCACTCTCTT TTTCCAATGA TTATCCTTTC AAACCTCCAA AGGTTAAGTT TGAGACATGT TGCTTCCACC CCAATGTTGA TGTCTATGGC AATATCTGCT TAGACATTCT TCAGGATAAG TGGTCATCTG CTTATGATGT CAGGACAATA CTACTATCGA TTCAGAGCCT CCTGGGAGAA CCGAACATCA GTTCACCATT GAACACTCAA GCAGCTCAGC TTTGGAGTAA CCAAGAAGAG TACAGGAAGA TGGTTGAGAA GCTCTACAAG CCTCCCAGTG CATGATTTCT GCAAGCTGTT CTGAT
Length585
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25165407.. 25166705
Download Sequence
A.thaliana
AGI-codeAT1G50490.1
Descriptionubiquitin-conjugating enzyme 20
TAIR curator summaryEncodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in diving cells, but also in other non-dividing cells.
Alias[UBC20][ubiquitin-conjugating enzyme 20]
Gene coexpression
MR
MR Locus Description
7.34847 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
10.2956 Ahg470918 syntaxin of plants 111
18.9737 Ahg481792 Pathogenesis-related thaumatin superfamily protein
21.6564 Ahg470351 targeting protein for XKLP2
26.3629 Ahg920750 Pathogenesis-related thaumatin superfamily protein
29.8831 Ahg473799 Cyclin A1;1
32.187 Ahg491360 Transducin family protein / WD-40 repeat family protein
32.6497 Ahg494222 Pectin lyase-like superfamily protein
33.3167 Ahg482818 glycerol-3-phosphate acyltransferase 6
33.8231 Ahg351411 HXXXD-type acyl-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression