Detail



ID : Ahg923526

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923526|scaffold_104807.1
Sequence
ACAACGAGAA GCACAAAGCC ATGGAGTTGG AATTCCGGCG TCGCGACTAT GGAGCTACAC ATGAATCTCA ATTTCTTCCT CGGTCAGAAG CTCTAAAGCA TCCTCTTTCC TCTACACTTG CTTCCCGTCA ACAACAGGCT AAAACTGTCA GAGGTAGCGA TCTTGACTTC TTTGATCCGT TGCGGGGATT GGATGTGAAT GCTTCTGCAG AAGAGAAGGT TGAAGATACT TCTATATCCA TTGAAGCTGT AACTCAGGAT CTGATTAAGG AGTGGAAATC ACTTAAAAGA GTCTTAATGC AGCGGTTTCC TGTCTCCAAA CTTATACTTT ACTTTACTCA ATCAACAGTT GAGGCCCCTT CTGCTCTTTC CCATTCGGAG GAAACCGGTA GCGAACAAAC TTCTCTGGAA GAGCCGGCCA AAATAATCAA CCAACAGGAA TACATAGCCA AAGTGCATGA GCTAAGAGAT GGAATTAAAT GCGCTTGGCA GGCTGAAGAT CGAGTAACAT CGTTGAAGTT ATCAATAAAG GTCACAAAAC TTCTGATGGA TACAACAGTT TTGCAGTTTT ATCCTACAGT CTTTGTCATT GTCACTGACA TGCTAGATAT GCTTGGGGAT ATGGTGTGGG AACGGATCAA ACAGAAAGCA GAACTTGATG TAGATGGAAC AGTGATCTGC TCCTTACCGA AGAGACTTGC TATAACTGGT TTTGCAAAGT TGGTTCTGTT CGAGAACTTC TCCCTCGCAT GTAAAACCTC TATCAATTAT TATTTTCTTA TTCTCCCTAC CTTCCTCTGC CTTAGCTTTG GCTTTTCTTT GTATGCCCAT AGTTATCTGG AGCTTGCGAT CTTGCCTTGC TGGCGTTTCC TCATTAATCA ACCCATGGAA GTTCTGGATC GTTTAGTCAT GATGGTGAGA GGTCTCGCAG ATCCACTGGC ATCTTTGTAT TGTCGCCTTT ATATGGTGCA TCGCATGCAG AAGTTCGGCT TCTGCAATTC TGGATATTTA ATAAAATGCA TCAAGGATAT TGAAGATGTA TTAACACCTG TTTTAGTGGA CAAGGAGGGG TATTCCTATA TTACAGACGA CAAAAAGTTG CTTTTTAGTT TGATGGAACC AGCCATCGAG TATATAGTGA AATGCTTATT TCTAACTGGA CGTCAGGAGA ACAATGTCTT GAGCATGCTT GAGGAGCTTG GATTTGGAAG GAACAAATTT CAGTCATCTT GCAACTCTTC GCATGTGTCC ATTTTACTTC ATCATCTACT CAAGGAACTT CCATCTGAAT TAGTTATTTC ACTAACTACG GAGATCCTGG ATATGATTAA ATGCAGCAAT GATTGTTCCT TTAGTCAGGT TTTGAATTAT AGGTTATTGG GAAATAAACT GTCTGAAGGG AAATCTCAAG AAGGTTTTCT CAGTTCACTC ATTGATGAAG TTATTCAGGC CGCTTCCCAG TATCAGTCAC TGTATGACTA CTTAAGAATT ATGGACGCAT ATGTGGATCT TATGTTGCAG AACAAGATGG AAAATCATCT GGATGCTCTC TTGGATGATA TTGTAAATCT AGCTCGCGAA AAGTTTCTTT CTGAAGAAGA ACAAGCAAGT TTGCAATCCA TAATTTTGAA GCTGCTCGCT CATTTCGAGA ACTTGCAAGA AGTACTTCCT CTGAATCATT TCATCGAGAT TCTGGATCTT ATGTCTGGGA CTTCAAAGAG CAGTGTAAAC ATGCATCTTC TTAACATGGG TACAAGGAAT GGCTGCATTT GTGATTCAAC AACAGTGCAA TTTCTTTTTG AAGTTTCTCA GGCTCTTTAT GATGCTACAG ATTTCGTTCA CATAAAGGAT GATGACAATA GACAGACATC ACATTTAATT TCTCGTTTTG TGGAGATGGT TGACTATGGG GCAGAAATGG AACGCCATTT GATGTTTTTG GCAGAGTGTC GTGAGGCCTT TAATGGGATA CATGAACTTA AGGAGACACT TGTCCGTTCA AGCAACACCT TAGCAGTAAA AGCACTGAAA GCAGGAAAGA AGCATACCAA CTTTGTAAAA TCTTGCCTAG CATTTAGCGA AGTGACCGTC CCATCTATTT CATCTCCCAC GAAACACTTA AATCTTTATC TTGAAACTGC TGAGGTTGCT CTTTTAGGTG GTTTGATTTC TCATTCAGAC GGACTGGTCA TGTCAGCTGT TGAGTATCTA GAGAATGTAG CGGTAACAGA TGGTTTAAAA TCAATTGACG TAGATAGTAT GGCCTCGGTT GTATGCAAAT TGTGCAGCCT CTTGGTAATG GTCCCAGGTC ATCCCGAGAA AGGAGTGATG GAGATCCTTA AAAGTATTTT CTCTGCTACT TGTTCTAGTT CATGGGCAAC GCCGAGATTA AAGGTGAAGA TATTCTGTGC TATAATGTCA CTGTTGTCAA CACTTTCTCA GGACAATCTG CCTTACCATT CTGCCAATCC AGAGATAATT GGAAATGATT TGTTGTTCTT TGGTGATTCA TCATACAAGC AGAAACTTGT CTCGTGTAGT CAGTTCGTTC TAAGTGAGCT ATTAGATGCT ATTGAGCAAG AGTCTTCACA GATTGCTCGG GGGAATATGG CCCTTGAAGC TTGCAATTGC ATATCATTAG CACTAGTTGT ACTGTTTCTC CCAAGTTTTG CATATTTTCT CATTCCTGAT AAGTTAAAAG TTGTATTAAC TTGGGTTGGT GACATGTTTG ATGATGTGCA GATGAATGAG AAAGTCACAG AACTTTGCTT GAGACTGCTG GAAACAGCAA AAGATTGTTT GGGTGCCAAC GACAGGTACA CCGAGTCGAC TAAGAAATCA CTCCAACTAT GATACACCGA GTCAATGTTA CA 
Length2872
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25320301.. 25327263
Download Sequence
A.thaliana
AGI-codeAT1G50730.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.19615 Ahg475062 Pentatricopeptide repeat (PPR) superfamily protein
5.65685 Ahg902166 guanylate kinase 1
6.7082 Ahg931248 UNC-50 family protein
14.7309 Ahg494541 methyltransferases
27.2764 Ahg471748 Transducin/WD40 repeat-like superfamily protein
32.3728 Ahg901939
37.0945 Ahg483706 shrunken seed protein (SSE1)
38.4578 Ahg922436 RING/FYVE/PHD zinc finger superfamily protein
59.0931 Ahg473066 syntaxin of plants 61
62.9285 Ahg327694 transducin family protein / WD-40 repeat family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression