Detail



ID : Ahg923635

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923635|scaffold_104916.1
Sequence
TTTCTCTCTC TAATAAGTAA GGTTTTGATC TTTTTCAAGA TCAAACAAAA AAAAATGGAG TTAGAGAGTA CGAGCAATGG CCGACGTCCA CCGCCGCCGG CAGAGATTGG CCGTGGGGCG TACTTGGCGT GGGAAGATTT GACGGTGGTT ATACCAAACT TTAGTGGTGG TCCGACTCGA AGATTGCTCG ATGGACTTAA CGGTCATGCT GAACCGGGTC GGATTATGGC CATTATGGGT CCTTCCGGAT CCGGCAAGTC TACGCTTCTT GATTCTCTCG CAGGTAGACT CGCAAGAAAC GTGATTATGA CCGGTAATCT TCTATTGAAC GGAAAGAAGG CAAGACTAGA CTACGGCCTC GTCGCTTATG TAACACAAGA GGACATTTTG ATGGGAACAC TAACGGTGAG GGAGACAATA ACATACTCAG CTCATCTAAG GCTGTCTAGT GATTTGACCA AAGAAGAAGT CAACGACATT GTTGAAGGAA CAATCATTGA GCTTGGTCTT CAAGATTGTG CAGACAGAGT CATAGGTAAT TGGCACTCTA GAGGAGTGAG TGGCGGTGAG AGGAAACGCG TTAGCGTTGC GTTGGAGATC TTAACGCGGC CGCAAATTTT GTTTCTTGAT GAACCCACTA GTGGTTTGGA CAGTGCTTCT GCTTTCTTTG TGATTCAAGC GCTTAGAAAT ATCGCTCGAG ATGGTGGTAG AACCGTTGTT TCATCGATTC ACCAGCCTAG TAGCGAAGTT TTCGCTCTCT TTGATGATCT ATTTTTGCTC TCTAGTGGAG AGACTGTTTA TTTTGGCGAG TCCAAGTTTG CTGTTGAGTT CTTTGCCGAA GCGGGTTTTC CTTGCCCGAA GAAACGGAAT CCTTCTGATC ATTTCCTAAG ATGTATAAAC TCGGACTTTG ATACCGTTAC AGCTACACTC AAAGGATCAC AGAGGATTCG GGAGACACCA GCTACATCAG ATCCTTTAAT GAATCTAGCA ACATCTGAGA TCAAAGCTAG ACTTGTTGAG AATTATCGTC GTTCAATCTA CGCGAAATCT GCAAAATCTC GCATCCGTGA ATTAGCTAGC ATTGAAGGAC ATCATGGGAT GGAAGTGAGA AAGGGAAGCG AAGCGACGTG GTTTAAACAG CTAAGAACTT TGACAAAGAG ATCATTTGTG AACATGACCC GCGATATTGG ATACTATTGG TCAAGAATTG TGATCTATAT TGTGGTATCA TTCTGCGTCG GGACAATCTT TTACGATGTA GGGCATAGCT ACACATCGAT CTTGGCTCGG GTTTCTTGTG GTGGATTCAT TACCGGTTTC ATGACTTTCA TGTCCATTGG AGGGTTTCCT TCTTTCATTG AAGAAATGAA AGTGTTCTAT AAAGAGAGAT TGAGTGGTTA CTACGGTGTT TCGGTTTATA TCATATCGAA TTACGTCTCT TCTTTCCCGT TCTTGGTAGC GATTGCGCTC ATCACAGGGA GTATTACTTA CAACATGGTG AAATTCCGTC CTGGGGTCTC GTATTGGGCT TTCTTCTGTC TCAACATATT CTTCTCTGTC TCAGTCATTG AGAGTCTCAT GATGGTTGTG GCTTCTCTTG TTCCAAATTT CTTGATGGGT CTAATCACAG GAGCAGGCAT CATTGGAATC ATCATGATGA CTTCTGGATT CTTCCGTTTG CTTCCCGATC TTCCAAAGGT TTTCTGGCGC TACCCGATTT CCTTCATGAG TTATGGTTCT TGGGCTATTC AGGGAGCATA CAAGAACGAT TTTCTTGGTC TAGAGTTCGA CCCGATGTTT GCGGGGGAAC CCAAGATGAC AGGAGAGCAA GTGATAAACA AGATATTCGG AGTGCAAGTC ACACATTCTA AGTGGTGGGA CTTATCAGCG ATCGTGTTGA TCCTTGTGTG TTACCGCATT CTCTTCTTCA TAGTCTTGAA GCTTAAGGAG AGAGCAGAGC CGGCTTTGAA GGCGATACAA GCAAAGAGAA CGATGAAGAC TCTCAAAAAG AGACCGTCTT TCAAGAAAGT TCCATCTCTA TCTTCACTAT CTTCAAGGAG ACACCAACCT CTACACTCAC TTTCTTCTCA AGAAGGTCTT ACCTCTCCAA TTAATTAAAG ACTATATCTA TATGTGTA 
Length2138
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25873165.. 25876385
Download Sequence
A.thaliana
AGI-codeAT1G51500.1
DescriptionABC-2 type transporter family protein
TAIR curator summaryEncodes an ABC transporter involved in cuticular wax biosynthesis. Lines carrying recessive mutations in this locus have weakly glaucous stem surface, and relative elevated secondary alcohols and ketones.
Alias[ABCG12][AtABCG12][ATWBC12][CER5][D3][WBC12][ATP-binding cassette G12][ARABIDOPSIS THALIANA WHITE-BROWN COMPLEX 12][ECERIFERUM 5][WHITE-BROWN COMPLEX 12]
Gene coexpression
MR
MR Locus Description
4.3589 Ahg489420 BURP domain-containing protein
7.2111 Ahg926134 3-ketoacyl-CoA synthase 6
8.7178 Ahg925873 BURP domain-containing protein
10.583 Ahg929660
10.9087 Ahg891467 alpha/beta-Hydrolases superfamily protein
10.9545 Ahg890595 ARM repeat superfamily protein
12.3693 Ahg471022 Protein of unknown function, DUF538
14.4914 Ahg489422 Tetratricopeptide repeat (TPR)-like superfamily protein
14.8324 Ahg485079 Glycosyl hydrolase family protein
15 Ahg485226 HXXXD-type acyl-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression