Detail



ID : Ahg485079

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485079|fgenesh2_kg.5__1071__AT3G47000.1
Sequence
AAGAAGAGTA AAGAAAATGG TGGTCAAGGA GGAGTCATCA TGCGTTTACA AGAACCAAGA CGCGCCAGTG GAGGTGCGTG TAAAGGACCT TCTCTCTCGC ATGACTTTGC CGGAGAAGAT CGGTCAGATG ACTCAAATCG AACGCAGAGT CGCTTCTCAC GCCGCCTTTA CAGATTTCTT CATCGGAAGT GTATTAAACG CCGGAGGGAG TGTGCCGTTT GAGGATGCTA AGTCGTCGGA TTGGGCTGAT ATGATCGACA GTTTTCAGCG TTCAGCGTTA GCGTCGCGTT TGGGAATTCC AATCATCTAC GGTACTGACG CTGTCCACGG GAACAACAAT GTCTACGGCG CCACCGTCTT CCCCCACAAC ATTGGCCTCG GAGCCACCAG AGACGCAGAT TTGGTAAGAA GAATTGGAGC TGCAACTGCA CTTGAAATAA GAGCGAGCGG GGCTCATTGG GCGTTTGCTC CTTGCGTGGC CGTTTTGAGA GATCCGAGAT GGGGACGATG CTATGAGAGT TATGGAGAAG ATCCTGGACT TGTCTGTGAG ATGACTTCGC TTGTCTCGGG ACTACAAGGC GTGCCACCAG AAGAACACCC AAATGGTTAT CCTTTTGTTG CGGGAAGAAA CAATGTCGTC GCGTGTGTCA AACACTTTGT TGGAGATGGT GGTACCGACA AGGGCGTAAA CGAAGGGAAC ACCATTGCGT CATATGAAGA CTTAGAGAAG ATACACATTC CTCCATATCT GAACTGTCTT GCTCAGGGAG TCTCCACGGT TATGGCATCT TACTCCAGTT GGAATGGAAC TAGACTTCAC GCTGACTGTT TTCTCTTGAC AGAAATTCTA AAGGAAAAAC TCGGTTTCAA GGGATTTCTA GTCTCAGACT GGGAAGGTTT GGACCGGCTT AGTGAGCCTC AGGGATCAAA CTACCGTTAC TGCATTAAAA CTGCGGTTAA TGCTGGCATT GACATGGTTA TGGTACCATT CAAGTACGAA CAGTTCATAC AGGACATGAC AGATCTGGTA GAGTCAGGGG AAATATCCAT GGATCGGGTC AATGATGCTG TTGAAAGAAT AGTCAGAGTG AAATTTGTCG CTGGTCTCTT CGAATATCCT CTCACAGATC GATCATTGTT ACCTATTGTT GGTTGCAAGG AACATAGAGA ATTGGCGCAG GAAGCAGTTA GAAAGTCGTT AGTTCTGCTA AAGAATGGCA AAAATGCTGA TAAACCATTT CTGCCACTAG ATCGCCACGC CAAGAGGATT CTAGTCACTG GAACTCACGC AGATGATCTT GGATATCAGT GCGGAGGATG GACAAAGACA TGGTTCGGTC TAAGCGGCAG GATCACAATC GGCACGACGC TTTTGGACGC CATTAAAGAA GCAGTTGGAG ACGAAACTGA AGTAATCTAT GAGAAAACTC CATCAAAGGA AACCTTAGCC TCAAGTGAAG GATTCTCTTA CGCCATTGTT GCAGTCGGGG AACCGCCCTA TGCAGAGACG ATGGGGGATA ACTCGGAACT CAAAATATCA TTTAATGGTA GCGACATTGT AACTGCGGTA GCAGAGATAA TCCCGACTCT GGTGATCTTG ATCTCAGGAC GACCTGTGGT TCTGGAGCCG ACGGTTCTTG AAAAGACAGA GGCTCTGGTC GCTGCTTGGC TGCCTGGAAC AGAAGGGCAA GGGATGGCTG ACGTTATTTT TGGAGATTAT GACTTCAAGG GGAAGTTACC AGTGAGTTGG TTCAAACGTG TTGAGCATTT GCCACTAGAT GCTCAGACCA ATTCGTATGA CCCATTGTTC CCTTTTGGTT TCGGTCTCAA TTCAAAACCG GTGTAACTTC ACCAGTCGGA TTGATGAACC GGAACGTCGG GGAAGTATGT TATGACATAT ATTACACGCA ATGTCGTATT TGTATAAGCA AACCATGAGA AAACAATGTA TTGTTGATGT GCTTTTATGA GGAAAAGATA TGAGAAGGAA ACCAAATATT GGTTTTGATG T 
Length2011
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12381812.. 12384868
Download Sequence
A.thaliana
AGI-codeAT3G47000.1
DescriptionGlycosyl hydrolase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.9087 Ahg491138 Transducin/WD40 repeat-like superfamily protein
14.8324 Ahg923635 ABC-2 type transporter family protein
16.8523 Ahg473263 multidrug resistance-associated protein 1
17.3205 Ahg490566 cationic amino acid transporter 9
17.9444 Ahg943735 Mechanosensitive ion channel protein
26.096 Ahg940592 DEAD/DEAH box RNA helicase family protein
28.4605 Ahg490089 tRNA synthetase class I (I, L, M and V) family protein
29.2404 Ahg473985 Protein of unknown function (DUF760)
31.305 Ahg327738 receptor-like protein kinase 4
31.4166 Ahg941582 Avirulence induced gene (AIG1) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression