Detail


ID : Ahg923661

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923661|scaffold_104942.1
Sequence
CTCTCCAGTT CTCACAGCAA AGATGCCCAG AGTAAGCGTG AAGTGGCAAA AGAATGTGTT TGATGGTATC GAGATCGACA CTAGTCTGCC TCCTTTTGTT TTCAAAGCTC ATTTGTATGA TTTGACTGGA GTTCCTCCTG AACGCCAAAA GATCATGGTC AAAGGTGGTC TCTTAAAGGA TGATGGAGAT TGGTCTGCTA TTGGATTGAA AGAAGGTCAA AAATTGATGA TGATGGGAAC TGCTGATGAA ATTGTGAAAG CTCCTGAAAA GGCCATTGTT TTTGCGGAGG ATTTACCTGA AGAAGCGCAA GCCACTAATC TGGGTTACAG TGCTGGTCTT GTCAATCTTG GCAACACGTG TTACATGAAC TCCACGGTGC AGTGCTTAAA ATCTGTCCCA GAGTTGAAAT CTGCATTATC TAATTACTCA CTTGCTGCAC GAAGCAATGA TGTCGACCAG ACTTCTCACA TGCTCACAGT TGCCACACGT GAGTTATTCG GTGAGCTTGA TAGAAGTGTC AATGCTGTTT CGCCTACACA GTTCTGGATG GTATTACGAA AAAAGTATCC TCAGTTTAGT CAGTTGCAGA ATGGAATGCA CATGCAGCAG GATGCTGAAG AATGTTGGAC ACAACTGTTA TACACTCTTT CTCAGTCCCT TAAAGCACCA ACTTCCAGCG AAGATTCTGA TGCTGTGAAA GCTCTGTTTG GTGTCAATCT TCGGAGCAGG TTGCATTGTC AAGAAAGTGG CGAAGAAAGC TCAGAGACAG AATCTGTATA TTCTCTAAAA TGTCATATAT CACATGAAGT GAACCACTTG CATGAAGGAT TAAAACATGG ACTGAAAGGG GAACTTGAAA AAACATCTCC TGCTCTTGGC CGTACTGCAC TTTACGTCAA GGAGTCACTT ATAGATTCCT TGCCAAGGTA CTTGACTGTT CAGTTCGTGC GATTTTTCTG GAAAAGGGAG AGTAATCAGA AAGCAAAGAT TCTCAGGAAA GTGGATTATC CGCTGGTGTT GGATATATTT GACCTTTGCT CTGAGGATCT TCGGAAGAAA CTGGAAGCTC CTCGCCAGAA ACTTAGAGAT GAGGAAGGTA AAAAGCTTGG TCTTCAAACT AGTGCTAAGA GTGGCTCAAA GGACAGTGAT GTGAAAATGA CTGATGCAGA GGCGTCAGCA AATGGAAGTG GAGAATCATC CACAGTAAAC CCACAGGAAG GTGCTACTTC TGAGAAGGAA ACTCACATGA CTGGAATCTA TGACTTGGTC GCTGTGCTGA CCCACAAGGG CAGGAGTGCA GACTCTGGTC ATTATGTTGC ATGGGTCAAG CAAGAGAGTG GCAAATGGAT TCAATATGAT GATGACAACC CGAGCATGCA ACGCGAGGAA GACATCACAA AGCTATCCGG AGGAGGTGAT TGGCATATGG CGTACATCAC AATGTACAAA GCCCGCTTCG TCTCCATGTA ATCTCTCTTT CTTTTGATGA T
Length1491
Protein Sequence
Protein Residue
Map Locationscaffold_1: 26003954.. 26008288
Download Sequence
A.thaliana
AGI-codeAT1G51710.1
Descriptionubiquitin-specific protease 6
TAIR curator summaryUbiquitin-specific protease 6 (UBP6). Deubiquinating enzyme. Interacts with calmodulin.
Alias[ATUBP6][UBP6][ubiquitin-specific protease 6]
Gene coexpression
MR
MR Locus Description
11.8322 Ahg479589 ubiquitin-specific protease 14
15.2315 Ahg481564 DNAJ heat shock N-terminal domain-containing protein
18.4932 Ahg483376 citrate synthase 3
18.6548 Ahg483365
20.3715 Ahg938681 Tetratricopeptide repeat (TPR)-like superfamily protein
21.3542 Ahg340908 glucan synthase-like 10
26.0768 Ahg478699 Cwf15 / Cwc15 cell cycle control family protein
31.749 Ahg916553 Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain
31.9374 Ahg324433 O-acetylserine (thiol) lyase isoform C
40.5832 Ahg936489 succinate dehydrogenase 2-1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression