Detail



ID : Ahg936489

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936489|scaffold_500680.1
Sequence
GATTTCTCCG AGAGAAAAAA AATGGCGTCT GGTTTGATCG GAAGATTGGT TGGAACGAAA CCGTCGAAAT TAGCCACGGC GGTGCGGTTA ATTCCGGCGA GATGGACCTC TACGGGAGCG GAGGCGGAAA CAAAAGCTTC GTCTGGCGGC GGAAGAGGAT CGAACTTGAA GACTTTTCAG ATCTATCGAT GGAATCCAGA TAATCCAGGG AAGCCAGAGC TTAAAGATTA CCAGGTCGAT CTCAAGGATT GTGGTCCAAT GGTTTTAGAT GCTTTGATTA AGATCAAAAA CGAAATGGAT CCATCGCTTA CCTTCCGTAG ATCGTGCCGT GAAGGGATCT GTGGTTCATG TGCTATGAAC ATTGATGGAT GTAATGGACT TGCTTGTTTA ACGAAGATTC AAGATGGAGC ATCGGGGACG ACGATTACAC CGTTGCCTCA TATGTTTGTG ATTAAGGATC TTGTGGTTGA TATGACTAAT TTTTATAATC AGTATAAGAG TATTGAGCCG TGGTTGAAGA GGAAGACTCC AGCATCTGTT CCTGCTAAGG AGATTTTGCA GAGTAAGAAG GATAGAGCTA AGCTTGATGG GATGTATGAG TGTATTCTTT GTGCTTGTTG TAGCACATCT TGTCCTAGTT ACTGGTGGAA TCCTGAGTCT TACCTTGGTC CAGCTGCTTT GCTACATGCT AATAGGTGGA TAAGTGATAG TCGTGATGAG TACACTAAGG AAAGACTTGA AGCTGTTGAT GACGAGTTCA AGCTTTACCG TTGCCATACA ATCTTGAACT GTGCTCGTGC CTGTCCAAAG GGTTTGAACC CAGGAAAACA GATCGCACAC ATCAAGCAAC TTCAACGTTG AAACAGCTAA GTTTGTGTGA G 
Length881
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3472966.. 3474634
Download Sequence
A.thaliana
AGI-codeAT3G27380.1
Descriptionsuccinate dehydrogenase 2-1
TAIR curator summaryOne of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.
Alias[SDH2-1][succinate dehydrogenase 2-1]
Gene coexpression
MR
MR Locus Description
8.77496 Ahg942061 RNA recognition motif (RRM)-containing protein
12.0416 Ahg482717 adenosine kinase
13.4164 Ahg332329 ABC transporter family protein
14.4914 Ahg922760 Endoplasmic reticulum vesicle transporter protein
15.1658 Ahg492472 UDP-D-glucose/UDP-D-galactose 4-epimerase 2
17.8606 Ahg496351
18.4932 Ahg488714 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
18.9737 Ahg919955 Protein kinase superfamily protein
19.3649 Ahg479675 UDP-Glycosyltransferase superfamily protein
22.3607 Ahg494872 nitrile specifier protein 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression