Detail



ID : Ahg923994

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923994|scaffold_105275.1
Sequence
TTTAGGGTTT GAATTTCCGT ATTTGCAGAT GGCGAGCAAT ATCATCTTGT TCGAGGATAT CTTCGTGGTC GATAAGCTAG ACCCTGATGG CAAAAAGTTT GATAAAGTTA CTCGCGTTCA AGCTACGAGC CACAACTTGG AAATGTTTAT GCATTTAGAT GTTAACACAG AGGTTTATCC ATTGGCTGTT GGTGATAAGT TCACACTTGC GTTAGCTCCC ACGCTTAATC TCGATGGAAC CCCTGATACC GGATATTTTA CTCCGGGAGC AAAGAAAACA CTTGCGGATA AGTATGAATA CATCATGCAC GGGAAGCTTT ACAAGATCTC TGAGCGTGAT GGCAAAACTC CAAAAGCAGA GCTATATGTT TCGTTTGGCG GCCTCCTGAT GTTGCTTAAG GGAGATCCTG CTCACATTTC TCACTTCGAA CTCGACCAGA GGCTCTTCCT ACTCATGAGG AAGCTGTGAG ATACCATTGT CTGATCATTA 
Length490
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27607244.. 27608410
Download Sequence
A.thaliana
AGI-codeAT1G54250.1
DescriptionRNA polymerase Rpb8
TAIR curator summaryOne of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600.
Alias[ATRPABC16.5][NRPB8A][NRPE8A]
Gene coexpression
MR
MR Locus Description
8.77496 Ahg950672 ubiquitin carrier protein 7
26.5518 Ahg923649 Cation efflux family protein
28.1425 Ahg480346 CBS domain-containing protein with a domain of unknown function (DUF21)
28.5307 Ahg472799 Phosphoribulokinase / Uridine kinase family
39.3954 Ahg470691 NAD(P)-linked oxidoreductase superfamily protein
42.5676 Ahg483462 Plant regulator RWP-RK family protein
54.2218 Ahg950803 conserved peptide upstream open reading frame 62
58.5833 Ahg496593 Inositol monophosphatase family protein
59.1946 Ahg356828 cold regulated gene 27
61.3107 Ahg918924 importin alpha isoform 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression