Detail



ID : Ahg925020

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925020|scaffold_200581.1
Sequence
ATTCGATTTC CGTACAAGCC ATGGCCGAAA CCTCGAAGGT AGTCAACGGT GGCGATTCCC TGGATCTTCA CTCACTTCTC TCTTCTTCGG CGAGGGATTT CCTCGTTCGT AATGACGGCG AACAGGTGAA AATTGACAGC TTGATAGGCA AGAAGATTGG GTTGTATTTT TCAGCTGCGT GGTGTGGACC GTGTCAGCGG TTTACTCCAC AGCTGGTGGA AGTTTACAAC GAACTCTCTT CGAAAGTTGG TTTTGAGATT GTCTTTGTGT CGGGTGATGA GGATGAGGAG TCTTTTGGAG ATTATTTCAG TAAGATGCCC TGGCTTGCTG TTCCGTTTAC TGATTCTGAA TCCCGTGACC GTTTGGATGA GTTGTTTAAG GTTAGGGGAA TACCTAACCT AGTGATGGTT GATGATCATG GTAAACTTGT GAATGAGAAT GGGGTTGGGG TCATACGAAG CTATGGAGCT GATGCTTATC CTTTCACACC GGAGAAAATG AAGGAGATCA AAGAGGACGA AGATAGAGCT CGGAGAGAAC AGACCTTAAG ATCCGTCTTG GTGACTCCTT CACGGGACTT TGTGATCTCG CCTGACGGAA ACAAGGTACC TGTATCAGAG CTTGAGGGAA AAACCATTGG CCTTCTCTTC TCGGTCGCCT CTTACAGGAA ATGCACAGAG TTTACTCCAA AGCTTGTTGA GTTTTATACG AAGTTGAAGG AGAATAAGGA GGATTTTGAG ATTGTGTTGA TATCTCTTGA TGATGATGAG GAGTCTTTTA ATCAGGAATT CAAGACCAAG CCATGGCTAT CGTTGCCGTT CAACGACAAA AGCGCATCGA AATTGGCTCG GCACTTCATG CTGGCAACGC TACCGACGCT GGTTATTCTT GGGCCTGATG GAAAAACCCG TCACTCGAAT GTCGCTGAAG CTATTGATGA CTATGGAGTT CTTGCTTATC CTTTCACTCC TGAGAAGTTT GAAGAACTCA AGGAGATAGA AAAGGCAAAG GTAGAGGCTC AAACGCTCGA GTCACTTCTT GTCTCAGGTG ATCTCAACTA TGTTCTTGGA AAAGATGGGG CTAAGGTGCT TATTTCGGAT CTGGTCGGGA AGAACATTCT TATATACTTC TCAGCTCACT GGTGTCCTCC TTGTCGCGCT TTTACACCAA AGCTTGTTGA AGTATACAAG CAGATAAAGG AGCGGGATGA AGCGTTTGAA TTGATCTTCA TCTCCAGTGA CCGTGACCAG GAATCATTTG ATGAGTACTA CTCGCAAATG CCGTGGCTGG CTCTTCCATT TGGTGATTCT AGAAAAACAT CCTTGGCACG AACCTTCAAG GTCGGTGGGA TCCCAATGCT AGCAGCTCTG GGACCAACTG GGAAAACTGT AACAAAAGAA GCAAGGGACC TTGTGGTAGC CCATGGAGCC GAGGCTTACC CTTTTACTGA GGAACGTTTG AAGGAGATTG AAGCTAAGTA CGATGACATG GCAAAAGAGT GGCCTAAGAA GGTGAAACAT GTACTTCATG AAGAACATGA GCTAGAACTG ACTCGTGTAC AGGTTTACAC GTGCGATAAG TGCGAGGAAG AAGGGACAAT ATGGTCTTAC CAGTGCGACG AATGCAACTT TGATCTTCAC GCCAAGTGTG CTTTAAAGGA GGACACAAAA GCAAACGGCG ATGAGGCTGT GAAAGAAGGT GACAGCGAGT CCACAGATGG TTGGGTTTGT GACGGAGACG TATGCACCAA GGCCTGATAG GTAGCTTCAG GCACAAT 
Length1777
Protein Sequence
Protein Residue
Map Locationscaffold_2: 2940110.. 2942413
Download Sequence
A.thaliana
AGI-codeAT1G60420.1
DescriptionDC1 domain-containing protein
TAIR curator summaryReduce transmission through pollen.
Alias
Gene coexpression
MR
MR Locus Description
7.07107 Ahg486839 Bax inhibitor-1 family protein
11.4891 Ahg903021 auxin transport protein (BIG)
12.53 Ahg478682 multidrug resistance-associated protein 3
12.7279 Ahg934288 Pyruvate kinase family protein
14.8997 Ahg934359 PLAC8 family protein
16.3095 Ahg338999 Protein kinase superfamily protein
19.6469 Ahg493778 DCD (Development and Cell Death) domain protein
23.2379 Ahg474229 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
23.5584 Ahg471548 ELM2 domain-containing protein
25.1992 Ahg483963 multidrug resistance-associated protein 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression