Detail



ID : Ahg474229

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474229|fgenesh2_kg.1__4183__AT1G51140.1
Sequence
AAGTTTCTCT CACGTTCTCT TTTTTAATTT TATTTTCTCG CCGGATAAAT CCTCCTCTCC CGGCGAACGA AACGTCCGGT GGTACTCTAA ACGGAGAAAA AAAAATAACA AAAGAAGAGA GAAACTCAAA AGCTACAAAG ATGGAATCAG AATTTCAGCA ACATCACTTT CTTCTCCACG ATCATCAACA TCAAAGACCT AGAAACTCAG GATTGATTCG TTACCAATCA GCACCAAGTT CGTATTTTTC GAGTTTCGGT GAATCAATCG AAGAGTTTTT AGATCGACCC ACGAGTCCTG AAACAGAGCG AATCTTATCT GGGTTTTTAC AAACCACCGA CACAAGCAAT AACGTTGATA GTTTCCTTCA CCATACTTTT AACAGTGATG GAACAGAGAA GAAACCTCCG GAAGTGAAAA CAGAGGAGGA AGATACAGAG ATTCCGGTGA CTGTGACGGC GATGGAGGTT GTTTCCGGTG AGATTTCAGT GAATCCTCAA GAATCGATTG GGTATGTAGC TTCGGTTTCG AGGAATTTAG GTCAGAATAA GAGACCAAGA GAGAAAGATG ATCGGACTCC GGTGAATAAT CTAGCTCGTC ATAATAGTTC ACCGGCCGGA TTATTTTCCT CCATTGATGT TGAAACAGCT TATGCAGCTG TAATGAAAAG TATGGGAGGT TTTGGAGGAA GTAATGTGGT GAGTACAAGC AATAATGAAG CTTCGTCTCT TACTCCTAGA AGCAAGTTAC TTCCTCCTAC TTCTAGAGCG ATGAGTCCGA TATCTGAGGT TGATGTTAAG CCCGGGTTTT CGGCTAGATT GCCTCCTCGG ACACTTTCCG GTGGGTTTAA TCGTTCGTTT GGGAATGAAG GGTCTGCTTC GTCTAAGCTT ACTGCTATTG CAAGGACTCA ATCTGGAGGT CTAGATCAAT ACAAAACCAA GGAAGAGGAT TCAGCAAGTA GACGTCCCCC TTTGGCACAT CACATGAGTT TGCCCAAGTC TTTATCAGAT ATTGAACAGT TACTGTCAGA TTCTATCCCC TGTAAGATCA GAGCCAAGCG GGGTTGTGCA ACTCATCCTC GCAGCATCGC CGAGAGGGTG AGAAGAACCA AGATCAGTGA AAGGATGAGG AAGCTGCAAG ACCTTGTTCC AAACATGGAC ACGCAAACAA ACACAGCAGA CATGTTGGAT CTTGCGGTTC AGTACATCAA GGACCTGCAA GAACAAGTGA AGACGCTCGA AGAGACTCGG GCAAGATGTA GATGCTCTAG TGCGTGAAAC TAGAAGTTGG AGTATGCGAG AGTGCTAGCC AGGGAGGGAT TTGTGCATAG AAGTATCGAT CGATTCAGCC TTTGGAGAAA AAGTCGAAGA TAGCAAAGTA GAGAAGAGAT CATGAATAGA GCTAAAATTG GTGGATGATG GTGAAAAGGG TTTAGTAAAG TTGGAACCTT TTTTTGGTAG GGAAGAAAGT AAGTTTGTGT AATGGTCCGA ACTCCAAAGC TATTGTATGT TGTTCTTACA CCCAAAGAAA AATGCAGAAC AGAAGTGATG TACAATGAGA AGCTTCTTTT ATTGTTGTAA CTCAAGAAAT AATTCAGGGT AATTAGTTTA TTTTCTTTTG TTGGAA 
Length1626
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25668694.. 25671024
Download Sequence
A.thaliana
AGI-codeAT1G51140.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summary
Alias[FBH3][FLOWERING BHLH 3]
Gene coexpression
MR
MR Locus Description
8.42615 Ahg478478 protein phosphatase 2CA
15.2971 Ahg940697 Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6
16.4924 Ahg905694 Auxin-responsive family protein
16.7929 Ahg495334 heat shock protein 90.1
16.9706 Ahg490014 PGR5-like B
17.8885 Ahg929041 serine acetyltransferase 2;2
19.3907 Ahg475854 aldehyde dehydrogenase 3H1
21.7486 Ahg488052 mechanosensitive channel of small conductance-like 10
21.9773 Ahg482707 plasma membrane intrinsic protein 2
23.2379 Ahg925020 DC1 domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression