| Annotation |
|---|
| Description | jgi|Araly1|925182|scaffold_200743.1 |
| Sequence |
GATCGGACGA GAGAGACGGA GAGAATGGCT CCGAAGAAGA AACCTCAGAA GCAAAGCAAC AAAGCTGCTT CGTCTTCTTC ATCGTCGAAA TCGAATTATC AGAAACCTTC TTCAGGTCCT AAGCTTCAGA TTTCGGCAGA GAACGAAGAT CGTTTGCGGC GGCTCTTGCT CAACTCTGGC CGCATCGGTC CTTCGGTTCC GGCTCCAATC AGTAATTCTC TCTCCAAAGC TCAAAAGACA AAGAAACTCA ATAATGTCTA TGAGAAGCTC TCTTGCGAAG GTTTCGTTGA TGATCAGATT GAGCTCGCTC TCTCTTCTCT TAGAGATGGA GCTACGTTTG AGGCTGCACT TGATTGGCTT TGCTTGAACT TGCCGAGTCA TGAGTTGCCA GTGAAGTTTT CTACTGGAGC TTCTCGCTTT CCTACCACAG GAGGTACTGT GGGTGTGATA TCGATCTCAC GGGATGATTG GAATGAATCT GCTGACTCTT CAGTCCAGGT AGAGGAGGAG GAGCCTGCGG TTTTCGTTCG AGTGAAGGGC AAACAAGATG AGGAAGATAC TCTTAATTCC GGCAAATCGT CTCAAGCTGA TTGGATTCGT CAGTATATGA TGAGACAGGA AGAGGAAGAA TTGGAATGTT GGGAAGATGA GGTAGATGGT ATTGACCCCG GAAAGAAGGT ATCTGGTCCA AGGCCATTCG ATGTGATTGC CAAAGAATAT TATTCGGCAA GGTCAGATGC TATAAAAGCT AAGGAGAAGC GTGATAAAAG AGGACAGGAG CAAGCAGGCC TAGCAATTCG GAAGCTCAAG CAAGAGATAT CTGATCTTGG GTTATCAGAA GCAATGTTGG AATCTGAATT TCAGCGTGAA CATGCTTTTG AAAGTGCTAC AGAACAAGAA TCAACGTGTC CCATTTCCAA TAACCTTCAT GAGTCAGTTG ATGCTGACGA TGTCTCTGTT CAGCAGTTAG ATAACTTGAC CTTAGATGCC AATCCTGCTG GGAGCTGTGA GTCTGAGGAA ATTCAAACTA AAGCTCTTCC TTCAAGTTCC TCAGGACAAG ATTTAGTTGC ATCGGATGAA GATTCAGAGG ACGTGGAACT TGGCGATACA TTCTTTGAAG AAATTCCGCC TTCTGAAATT TCACCCCATG AACTCCTGGA ATTGCAGAAG GAGGAAAAGA TGAGAGAACT ACGCAGTGAG AAAAATCTCG GGAAACTAGA TGGTATCTGG AAGAAGGGTG ATGCGCAAAA GATCCCAAAG GCATTTCTCC ATCAATTGTG TCAAAGATCA GGGTGGGAAG CACCAAAGTT CAATAAAGTA ACCGGTGAAG AAAGGAATTT CTCATATGCT GTAAGTATCC TGCGCAAAGC CAGTGGACGG GGTAAAAACA GACAAGCCGG GGGTCTTGTA ACTCTTCAAC TTCCTCTTAA AGATGATAAC TTTGAATCCA TCGAGGATGC ACAAAACAAA GTTGCGGCAT TTGCTCTTCA TAAGCTATTT TCTGATTTAC CTGTCCACTT TGCAATTACG GAGCCTTATG CCTCTCTAGT TTTGAACTGG AAACAAGAGG AATTGTTGTG TACCATACAA AGCACAGAAG AAGACCGAAG AGCTAATTTT GTTGATAAGT TTCTTGAGGA GGACAATTTC AGTTTGACCG CTTCGTCAAG TAGCATTGAC AATGCGCTTC CATTGGTAGA CTCCTATGTC AAAGAGAAGG ATGACTTGGG TGTTGTCAAA TCTAACCACA GAGCTAGAAA AGACTCTTAT ATAGAAGCTG AGTGTTTATC TCTCCAACGA AAACAAGAAA ACAAAAAGAG AACGCAAAAG TACAAGGACA TGTTGAAAAC TAGAACTGCT CTTCCTATAT CTGAAGTTAA GAATGGCATA CTCCAGCATC TGAAAGAAAA AGATGTCTTG GTGGTATGCG GAGAAACAGG CTCTGGAAAG ACTACACAGG TTCCCCAATT TATATTGGAT GATATGATTG ATTCAGGGCA TGGTGGATAC TGTAATATCA TATGCACACA ACCTCGGCGG ATAGCGGCTA TCTCTGTTGC TCAAAGAGTT GCTGATGAGC GTTGTGAATC CTCTCCAGGC TCAGATGACT CCTTGGTTGG GTATCAAGTT CGTCTTGAAA GTGCAAGGAG TGACAAGACT AGGCTGCTGT TTTGTACTAC TGGCATTCTA CTGAGGAAAC TCGCTGGGGA TAAAACCTTG AACGATGTTA CACATATTAT AGTCGATGAA GTGCATGAGC GGTCTCTTTT GGGTGATTTT CTTCTCATTA TTTTGAAGAC CCTGATTGAG AAGCAATCAT GTGATAATAC ATCACGTAAA CTTAAAGTTA TCCTTATGTC TGCTACTGTT GACGCTGATC TATTCTCAAG ATATTTTGGC CATTGTCCTG TGATAACTGC TCAAGGACGA ACACATCCAG TCACTACCCA CTTCCTGGAG GAGATTTATG AGAGTATTAA CTACCTTCTT GCTCCAGATT CTCCTGCTGC GCTAAGGTCT GATTCATCTA TTAAAGAAAA GCTTGGTTCT GTAAATGACC GTAGGGGAAA AAAGAATCTT GTATTGGCTG GCTGGGGCGA CGATTATTTG CTTTCGGAGG ACTGTCTTAA CCCATTTTAT GTTTCTAGTA ATTACAACTC ATACAGTGAC CAAACACAGC AAAATCTGAA AAGGTTAAAT GAGGATATAA TTGACTACGA GCTTCTTGAA GAGTTGATAT GCCACATTGA TGACACTTGT GAGGAAGGGG CCATTCTTAT ATTTTTGCCT GGAGTGTCAG AAATTTACAT GTTACTCGAT AGGATAGCTG CTTCCTATCG TTTTCGTGGA CCTGCTGCAG ATTGGCTTCT TCCCCTACAT TCTTCTATTG CATCTACAGA ACAGAGAAAG GTGTTTCTGC GTCCCCCTAA AGGCATACGG AAGGTTATCG CAGCTACAAA TATTGCAGAG ACCAGTATAA CAATTGATGA TGTGGTGTAT GTGATTGACA GTGGCAAACA CAAGGAAAAT CGCTACAATC CACAGAAGAA ATTGTCGAGC ATGGTGGAAG ATTGGATATC TCAAGCAAAT GCAAGACAAA GAACAGGAAG GGCTGGACGT GTCAAACCTG GGATTTGCTT TTCATTGTAC ACACGCTATA GGTTCGAGAA GCTAATGCGT CCCTATCAGG TTCCTGAGAT GCTGCGGATG CCATTAGTAG AGTTATGTCT ACAAATCAAA TTGCTTGGCT TGGGTCACAT TAAACCTTTT CTGTCCAAGG CTTTGGAACC TCCGAGTGAA GGTGCTATGA CCTCTGCGAT TTCATTGTTA CACGAGGTTG GTGCTGTTGA AGGGGATGAA GAGTTGACAC CACTTGGGCA TCATTTAGCG AAACTTCCTG TTGATGTGTT AATTGGAAAG ATGCTGTTAT ATGGTGGAAT ATTTGGTTGC TTATCACCTA TTCTCTCGAT CGCTGCTTTC TTGAGCTACA AATCGCCGTT TATATACCCC AAAGATGAGA AGCAAAATGT CGACCGGGTG AAACTTGCTC TTTTGTCTGA CAATCTGGGG AGCTCGAGTG ATTTAAACAA CAATGACAGA CAATCTGATC ACCTCCTTAT GATGGTTGCA TACGATAAAT GGGTGAAGAT ACTGCAGGAG CGAGGAATGA ACGCTGCACA GAGGTTCTGT GAATCAAAGT TCTTGAGCAG CTCAGTGATG CGGATGATCA GAGATATGAG GGTACAATTT GGCACATTAC TTGCCGATAT CGGGCTCATC AATCTTCCTA AAACAGGAGA GTTTTCGGGG AGAAAAAAGG AGAATCTTGA TGTCTGGTTT TCTGACCGAA CTCAACCTTT CAATATGTAT TCACAACAAC CTGAAGTTGT TAAGGCGATA TTGTGCGCAG GACTATATCC TAATATTGCA GCCAATGATA AGGGAATTAC AGAGACAGCG TTTAACAGTT TGACAAAGCA AGGAAACCAA ACAAAGAGCT ATTCGGCATG GTACGATGGC AGAAGAGAAG TTCATATCCA TCCATCTTCT ATAAACAGCA ACTTCAAAGC ATTTCAATAC CCTTTCCTTG TATTCCTTGA GAAGGTCGAA ACGAACAAAG TATATTTGCG AGATACAACC ATTGTATCTC CTTTCTCCAT TCTACTTTTT GGCGGTTCAA TCAATGTTCA TCATCAGAGT GGATCAGTCA CAATTGATGG GTGGTTGAAG GTAGCAGCAC CAGCTCAAAC TGCGGTTTTG TTCAAAGAGC TCCGGTTAAC CCTTCATTCC ATTCTCAAAG ATCTCATCCG AAAACCCGAG AAATCAGGTA TTGTCCACAA CGAAGTCGTC AAATCTATGG TCCATCTTCT TATAGAAGAA GGCAAACCGC AACACACATG AACTTAAAAA GGAAATAGTA TC |
| Length | 4422 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 3960769.. 3973052 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G58060.1 |
| Description | RNA helicase family protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg477212 | tetratricopeptide repeat (TPR)-containing protein |
| 2 |
Ahg493790 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 3.4641 |
Ahg478740 | mitogen-activated protein kinase kinase kinase 7 |
| 3.4641 |
Ahg928964 | Ubiquitin-conjugating enzyme/RWD-like protein |
| 4 |
Ahg484543 | golgin candidate 6 |
| 4.47214 |
Ahg951281 | Major facilitator superfamily protein |
| 5.19615 |
Ahg490767 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 6.48074 |
Ahg895753 | HSP20-like chaperones superfamily protein |
| 8 |
Ahg323324 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
| 10.7238 |
Ahg491902 | phosphate starvation response 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|