| Annotation |
|---|
| Description | jgi|Araly1|323324|fgenesh1_pm.C_scaffold_5000868 |
| Sequence |
ATGAACAGAG TCCAAGCAGG CAATGAGCTC GGCTTCCGTG TCGGATTCTC CGGTCATGGT GGTCACCTCC GCGTCGAGCC TCTTTACACG GCCGAGAGAG ACGACGCCGT GAACTCACTT CCCGATTTCG TATCCCCTCC TGCATTTGCC AAGGAAACAA AAGAATCAAT AAAGAAACAT ATTGAGGAGA AATATCTCCT ACCAAGACTG GAACCGGATC AATTTTCTGC TGAAAAAGCT GAGAATCAGT GGGATTTTGA TTGGTTTTCC AGGGTGAAGG TGCCCCTTCA ACCCTCTTTG CCAAGGCCCG TTGTGGTTCC GACTTGGGAG TTGCCATTCA GGCGTCAAAA AGTGGATACT GAGAATGGAG CGTGGGAGCC AAAATCAGTG GAGGTGGATT TGTCAGACCA AATGTATGGA GATCAAGATT CTGGATTTTT TCCACGAATG GTAGGACCTC CGAAGGATTT TCTGAGAGGA AGTGTCAACA ATCGCCCTTT CCGTCCAGGT GGCTTGGAGG ATTCACAGTC TTCAGAGAGA GTCCTTCCAG AGGGTGTCTC TAGCGGCCAA TGGGTACAGG AATTGCTAAA TGGGGGTCCT GCTCAAACTG TTCCTCCTAG TTTTAAGCAG AGTTTAGATC TTGGAGATCT GATGCCATAT CCCCAAACAT GGAGCGTTTA TGAGGATCAG AGTTCACATG GCAATGCTTC TGATGAAAAT TCGGTCTGTA GATCAATGTC ACTGGTCAAG TTGTCTATTC AGTTTGACGA TCTGCTCAAG AAGGCATGGG AAGAAGATAC TTTCTCCGAA CTTGAGAGAG ATGGTGTGTT TAATCATTCA TATCATACAG CTGGATCTGA GTCTCCAAAG GCAGAAGCTG AACCCGAAGC TAAAGCGAGC ATAAGCAATG AAGTCAGCAA GGGACTAGAG ACTGACGTCA CTGTGCTGGA TGAGATTTTG TCATCAGCAA AAACAGCAAT ATTGACGGAC GAGGCAGTTA CTGGGAACAG CGATAAACAA CTACGGAAAG AGGGATGGGC CACGAAAGGA GATAGCCAAG ACATTGCAGA CCGGTTTTAT GAGCTTGTTC CTGACATGGC GATTGAATTC CCTTTCGAAT TAGACAACTT TCAGAAGGAG GCTATCTGTT GTTTAGAAAA GGGGGAGTCT GTTTTTGTAG CAGCACATAC ATCAGCGGGG AAGACAGTTG TTGCAGAATA TGCATTCGCT TTGGCCACCA AGCACTGTAC ACGAGCTGTT TACACTGCTC CAATTAAAAC CATCAGCAAC CAAAAATACA GAGATTTTTG TGGGAAATTT GATGTAGGAC TTCTCACAGG TGATGTTAGC ATAAGGCCAG AGGCATCTTG TCTGATCATG ACTACTGAAA TATTAAGGTC AATGCTTTAT CGTGGTGCTG ATATCATACG TGATATAGAA TGGGTTATAT TTGATGAAGT TCACTATGTC AATGACGTAG AGAGAGGGGT TGTTTGGGAA GAAGTCATCA TCATGTTGCC AAGGCATATA AATTTTGTCC TCCTTTCTGC AACGGTGCCA AACACATTTG AATTTGTTGA TTGGATTGGC CGAACAAAAC AAAAAGAGAT ACGTGTTACT GGCACGACAA AAAGACCAGT TCCCCTAGAG CATTGTCTAT TTTATTCTGG AGAACTCTAC AAAGTTTGTG AGGATGAAGT TTTTATTCCT AAAGGGATAA AGGATGCTAA AGATTCACAA AAGAAGAAGA ATTCAAATGC AGTTAGTGTC GCTCCTAAAC AGTATACGGG ATCTTCAGCT CATCAAGATG GGAACAAATC TCAGAAACAT GTAGCTCATT CTCGTGGCAA GCAGAATAAA CACTCAAGTG CAAAAGATGT GGGAAAATCC TCTTACAGTG GTAACAGTCA GAACAATGGG GCATTTAGAC GATCAGCAGC TTCAAATTGG TTACTGCTTA TCAACAAGCT CTCAAAAAAG TCCCTGTTAC CTGTGGTTGT CTTCTGTTTC TCGAAGAATT ATTGTGATAG GTGTGCCGAC GCCTTAACTG GGACCGACCT CACCAGTAGC TCTGAGAAAA GTAAAATCCG TGTCTTTTGC GATAAAGCAT TTTCAAGATT GAAAGGGTCT GATCGGAATT TACCTCAGGT TCTCAGACTT CAAAGCTTAC TTCATAGAGG AATCGGTGTT CATCATGCTG GGCTGCTTCC AATTGTAAAG GAAGTTGTTG AAATGCTTTT TTGCCGTGGT GTTATTAAGG TGCTATTTTC AACGGAGACA TTTGCCATGG GGGTTAATGC TCCAGCTAGA ACGGTCGTTT TTGATGCTTT GAGGAAGTTT GATGGCAAGG AATTTAGACA ATTGCTTCCT GGAGAGTACA CTCAAATGGC AGGACGTGCT GGCAGAAGAG GACTTGACAA AACGGGCACA GTTGTTGTCA TGTGTCGCGA TGAAGTTCCA GATGAGAGTG ATCTGAGGCG TGTAATTGTT GGAAGCGCAA CAAGACTAGA ATCTCAGTTT CGACTAACCT ACATAATGAT CCTCCATCTT TTACGTGTTG AAGAATTGAA GGTGGAGGAC ATGCTGAAAA GAAGTTTTGC TGAATTCCAT GCTCAGAAGA AACTGCCCGA GAAACAACAG CTTCTCATGA GAAAACGTTC TCTACCAATC AAAAATATCG AAGCTGATCT ATTGATTTAT TCATCCAGAT GTATTAAAGG TGAACCGGCA ATTGAAGATT ACTATGACAT GTATATGGAA GCAAATGAAT ATAACAGCAA GATGTCGGAA GCGGTCATGC AGTCTCCTTA TGCCCAGAGT TTTCTTGTAC CAGGAAGAGT AGTGGTCATG AAATCTGGAA CGGGCATAGA CAATTTACTC GGAGTCGTTC TGAAGGGACC TTCCAACACT AACAGACAAT ATGTTGTTTT GGTGAAAAAA TCTGAAATAC CGCCACCAGA GAGAAATATG GTGAGCATTG GCAAGAAAAG CTCAGAGCCT TCTCAAGGTT ATTTTATTGC GCCCAAATCA AAACGTGGTT TTGAAGAAGA ATTTTATACG AAGCCGAGCT CTCGTAAAGG TTCCGCTGTG ATAAAGATAG AGCTCCCGTA CCATGGAGTC GCTGCTGGCG TAGGTTACGA GGTTAAAGGG TTTGATAACA AAGAATTTTT GTGCATATGC GATAGCAAGA TAACGATTGA TCAGGTGCGT CTACTCGAGG ATGGGAACAG GGCAGCTTTT TCGCAGACGG TTCAACAGCT TTTGGATCTG AAATCAGACG GAAACAAGTA TCCTCCTGCT CTAGACCCAG TAAAAGATTT GAAGCTGAAA GATGTTGAGC GTGTGGAGAC GTACTATAAA TGGACAAGCT TATTGCAAAA GATGTCCATG AATAAGTGCC AAGGTTGTGT CAAATTGGAA GAGCACATGA AGTTAGCTAG GGAGATTAAG AAGCATAAGA ATGATCTCAA AGATCTTGAA TTTCAAATGT CAGATGAAGC CCTATTACAG ATGCCTGCGT TTCAGGGCCG GATCGATGTT CTGAAGAACA TTGGGTGTAT AGATGATGAC CTCGTCGTCC AAATCAAAGG CCGTGTCGCT TGCGAGATGA ATTCTGGGGA AGAGTTGATT TGCACAGTGT GTCTGTTCGA GAATCAATTC GAAGAATTAG AACCAGAAGA AGCAGTGGCT ATAATGTCTG CCTTTGTCTT CCAACAGAAA AACACTTCAG CGCCTTCACT TACTCCTAAG CTGGCTAAGG CTAAACAAAG ACTCTATGAT ACAGCAATCA GACTTGGTGA ACTTCAAGCT CAGTACAATT TACAAATAGA CCCTGAAGAA TATGCCCAGG AGAATCTCAA ATTCGGTCTG GTTGAAGTCG TCTATGAGTG GGCAAAGGGG ACTCCATTTG CAGAGATATG TGAACTGACG GATGTCCCGG AAGGTCTGAT AGTTCGAACC ATTGTGAGAT TGGATGAGAC GTGCCGTGAG TTCAAGAACG CAGCCGCCAT TATGGGGAAC TCAGCGTTAC ATAAGAAAAT GGATGCGGCT TCAAATGCTA TAAAACGTGA CATCGTCTTT GCGGCTAGTC TGTATGTGAC CGGAGTATAA |
| Length | 4110 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 12360288.. 12367338 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G46960.1 |
| Description | RNA helicase, ATP-dependent, SK12/DOB1 protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg470804 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 2.23607 |
Ahg474119 | |
| 3.87298 |
Ahg480422 | Pentatricopeptide repeat (PPR) superfamily protein |
| 5.2915 |
Ahg485198 | Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 |
| 7.34847 |
Ahg940676 | alpha/beta-Hydrolases superfamily protein |
| 8 |
Ahg925182 | RNA helicase family protein |
| 9.38083 |
Ahg927794 | heat shock transcription factor A1E |
| 10.247 |
Ahg481710 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain |
| 11.3578 |
Ahg496142 | nuclear RNA polymerase C1 |
| 12.7279 |
Ahg471855 | Per1-like family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|