Detail



ID : Ahg925475

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925475|scaffold_201036.1
Sequence
ATTTGAGCTA TATTCTGTTC TAGAATATAT AGAATATGAT TAATTCTAAA TAGATAAGGA AAAATATTAA TAGAATAGTT AATTGATACG ATCTAGTAGT TTAGTGAATT TGTATGCATG CGCTATTTTA TTTGAGCCCG CTTAGCTCAG AGGTTAGAGC ATCGCATTTG TAATGCGATG GTCATCGGTT CGATTCCGAT AGCCGGCTTT TCCATATTTT TTCGTTTTTT TACATGATTT TTAATGTACT TTCAAAATCA AAGAAGATTG AAAAGACTTC TTTGACCTTT TTCCAAGAGT TACCACTCCA TTTATATTAT GTCATATAAA CTTCCATATA GGAAGATATA TTGGGTAAAA GAGTTCGATC TTTGCAAAAT AAATAAAGAA AATAAAGGAA AATTTTTGTG ATTTATTTGA TTTATATATA TTGTATATAC AATAAAAAAA ATCTGTATAT TGAGAGAATA TATCTTCTTA CTCTTTGTAT TCCAATAGTT TATTGGAGTG TATTTCACGT CATTTATCAT TATCATTTAG TTCAGTTTTA ATTTTATTTA GTTTTGTACA ATTTCAATAA AAAAAAGGAG TCTTTATGTC ACGTTACCGA GGGCCTCGTT TTAAAAAAAT ACGCCGTCTG GGGGCTTTAC CGGGACTAAC TAGTAAAAGG CCTAAGGCAG GAAGCGATCT TAGAAACCAA TCACGCTCCG TAAAAAAATC TCAATATCGT ATTCGTTTAG AAGAAAAACA AAAATTGCGT TTTCATTATG GTCTTACAGA ACGCCAATTA CTTAAATATG TGCGTATCGC CGGAAAAGCC AAGGGGTCAA CAGGTCAAGT TTTACTACAA TTACTTGAAA TGCGTTTGGA TAACATCCTT TTTCGATTGG GTATGGCTTT GACTATTCCT CAAGCGCGCC AATTAGTTAA TCATGGACAT ATTTTAGTTA ATGGTCGTAT AGTTGATATA CCAAGTTATC GCTGCAAACC CCGAGATATT ATTACAGTGA AGGATGAACA AAACTCTAGA ACTTTGGTTC AAAATCTTCT TGATTCATCT GCCCCTGAGG AATTGCCAAA CCATCTGACT CTTCACACAT TCCAATATGA AGGGTTAGTC AATCAAATAA TAGATAGGAA ATGCGTCGGT TTGAAAATAA ATGAATTGCT TGTCGTAGAA TATTACTCTC GACAGACTTA ATAAACCTAA CTTAAGTAAA AAAAATTACT AAAAAC 
Length1236
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8215712.. 8216947
Download Sequence
A.thaliana
AGI-codeATCG00380.1
Descriptionchloroplast ribosomal protein S4
TAIR curator summaryChloroplast encoded ribosomal protein S4
Alias[RPS4][chloroplast ribosomal protein S4]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg952681 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6
9.05539 Ahg925485 DNA-directed RNA polymerase family protein
11.8743 Ahg925484 RNA polymerase subunit beta
12.49 Ahg315521 Photosystem I, PsaA/PsaB protein
14.8661 Ahg925495
15.4919 Ahg946681 ribosomal protein S19
16.2481 Ahg907863 photosynthetic electron transfer B
18.5203 Ahg925496 maturase K
20.7364 Ahg333071 NADH dehydrogenase family protein
20.7364 Ahg952678 Cytochrome C assembly protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression