Detail



ID : Ahg925496

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925496|scaffold_201057.1
Sequence
TTATTTTGAC TGTATCGCAC TATGTGTCAT TTCAGAACTC AAGAAAATAA AGACTTTACC TTCAGTTCAA ATCGAATTTC AATCCAAATG GAGAAATTTC AAGGATATTT AGAGTTCGAT GGGGCTCGGC AACAGAGTTT TCTATATCCA CTTTTTTTTC GGGAGTATAT TTATGTACTT GCTTATGATC ATGGTTTAAA TAGATTAAAT AGAAATCGCT CTATTTTCTT GGAAAATACG GATTATGACA AAAAATATAG TTCACTAATT GTGAAACGCT TAATTTTGCG AATGTATGAA CAGAATCGTT TGATTATTCC CACTAAGGAT TTGAACCAAA ATTCCTTTTT GGGGCATACC AGTCTTTTCT ATTATCAAAT GATATCTGTT TTATTTGCAG TGATTGTCGA AATTCCATTT TCCCTAAGAT TAGGATCCTC TTTTCAAGGA AAACAATTAA AAAAATCTTA TAATTTACAA TCAATTCATT CAATATTTCC CTTTTTAGAA GACAAATTAG CACATTTTAA TTATGTGTTA GATGTACTAA TACCTTACCC CATCCATCTA GAAATCTTGG TTCAAATCCT ACGTTACTGG GTAAAAGATG CCTCTTCTTT GCATTTTTTT CGGTTCTGTT TATACGAGTA TTGCAATTGT AAGAATTTTT ATATTAAAAA AAAATCAATT TTGAATCCAA GATTTTTCTT GTTCTTATAT AATTCTCATG TATGTGAATA CGAATCCATC TTTTTTTTTC TACGCAAGCG GTCTTCGCAT TTACGATCGC CATCTTATGA AGTCCTTTTT GAGCGAATTT TTTTCTATGG AAAAATACAA CATTTTTTCA AAGTTTTTAT TAATAATTTT CCGGCGATCC TAGGGTTGCT CAAGGATCCT TTCATACATT ATGTTAGATA TCACGGAAGA TGCATTCTGG CAACAAAGGA TACGCCGCTT CTGATGAATA AATGGAAATA TTTTTTTGTT AATTTATGGC AATGTTATTT TTCCGTATGG TTTCAATCGC AAAAGGTCAA TATAAATCAA TTATCTAAAG ATAATTTAGA GTTTCTGGGT TATCTGTCAA GTTTGCGATT AAACCCTTTA GTGGTACGTA GTCAAATGCT AGAAAACTCA TTTCTAATAG ATAATGTTAG AATCAAATTG GATAGCAAAA TTCCAATTTC TTCTATTATT GGATCATTGG CTAAAGATAA ATTTTGTAAT GTATTAGGGC ATCCCATTAG TAAAGCGACC TGGACGGATT CATCAGATTC TGATATTCTC AACCGATTTG TGCGGATATG CAGAAATATT TCTCATTATT ACAGCGGATC TTCAAAAAAA AAAAATTTGT ATCGAATAAA ATATATACTT CGTCTTTGTT GTGTTAAAAC TTTGGCTCGT AAACACAAAA GTACTGTACG CGCTTTTTTA AAAAGGTTGG GCTCGGGTTT ATTGGAAGAA TTCCTTACGG GGGAAGACCA AGTTCTTTCT TTAATCTTCC CAAGAAGTTA TTATGCTTCT AAAAGATTAT ATCGAGTGCG AATTTGGTAT TTGGATATTC TTTATCTTAA TGATTTAGTC AATCATGAAT AATTGGGTTC TGAGACCCCA TAAATGAAAT CGAAATTTAT TATAATTTAT GCAGAGATAA CAAAAAAAAT CAATTAGTTT TTTATTATCA AAAGTTATTT ATTTCTATTA TTAAATGTTC ATACAGTAAG ACTACGATTA AATTTACTGA GTATTGAATT TGGAGTCCTA TTTATAAGGA ACCAAAGAAA CTGAGTTTTC TATGTATACA TAGAGAAAGC TGTGTGCAAT GAAAAATGCA AGCACGGTTT GGGGAGGGGT TTTTTACCTT TTTTTTTCAT TTTAACAAGG AAATTATCTA CTCCATCCGA CTAGTTCCGG GTTCGAGTCC CGGGCAACCC ACTATGGATC G 
Length1951
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8258416.. 8260366
Download Sequence
A.thaliana
AGI-codeATCG00040.1
Descriptionmaturase K
TAIR curator summaryEncodes a maturase located in the trnK intron in the chloroplast genome.
Alias[MATK][maturase K]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg925495
1.73205 Ahg925485 DNA-directed RNA polymerase family protein
2 Ahg925484 RNA polymerase subunit beta
4 Ahg936801 structural constituent of ribosome
4.89898 Ahg475579 ribosomal protein S2
5.47723 Ahg315521 Photosystem I, PsaA/PsaB protein
6.7082 Ahg925488 ATPase, F0 complex, subunit A protein
7.74597 Ahg333071 NADH dehydrogenase family protein
8.3666 Ahg907853 ribosomal protein L2
9.16515 Ahg925494 photosystem II reaction center protein K precursor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression