Detail



ID : Ahg925535

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925535|scaffold_201096.1
Sequence
GTGAATGACG ACCGTAACGG ATGTCGGCTC AATCTGAAGG AAATTATGCG GAAGCATTAC AGAATTATTA TGAAGCTATG CGACTAGAAA TTGACCCCTA TGATCGAAGT TATATACTCT ATAATATAGG CCTTATCCAT ACAAGTAATG GGGAACATAC CAAAGCTTTA GAATATTATT TTCGGGCATT AGAACGAAAC CCCTTTTTAC CACAAGCTTT TAATAATATG GCTGTGATCT GTCATTACGT GCGACTATCT CCACTATAGA AAAAAAGAAC AGCTAGTCA 
Length289
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8558283.. 8558571
Download Sequence
A.thaliana
AGI-codeATCG00360.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summaryEncodes a protein required for photosystem I assembly and stability. In Chlamydomonas reinhardtii, this protein seems to act as a PSI specific chaperone facilitating the assembly of the complex by interacting with PsaA and PsaD. A loss of function mutation in tobacco leads to a loss of photosystem I.
Alias[YCF3]
Gene coexpression
MR
MR Locus Description
8.3666 Ahg475584 ATP synthase subunit alpha
15.2971 Ahg925489 ATP synthase subunit C family protein
15.4272 Ahg475560 photosynthetic electron transfer A
16 Ahg925485 DNA-directed RNA polymerase family protein
20.199 Ahg925484 RNA polymerase subunit beta
20.664 Ahg315521 Photosystem I, PsaA/PsaB protein
21.6333 Ahg315511 CemA-like proton extrusion protein-related
22.8035 Ahg925496 maturase K
27.0185 Ahg475579 ribosomal protein S2
29.6648 Ahg952681 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression