Detail



ID : Ahg925577

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925577|scaffold_201138.1
Sequence
TGCCCTTTTT TTTTTTCCAG ATGCAAATTT TCGTGAAAAC ACTCACTGGC AAGACCATTA CTCTCGAGGT TGAGAGCTCT GACACCATTG ACAATGTTAA GGCAAAGATT CAGGATAAGG AAGGTATTCC TCCTGACCAG CAGAGATTGA TCTTCGCTGG TAAACAGTTA GAAGATGGTC GTACCTTGGC AGATTACAAT ATCCAGAAGG AATCAACACT CCATTTGGTT CTCAGGTTAA GAGGTGGTAT GCAGATTTTT GTGAAGACGT TGACTGGCAA AACCATTACT TTGGAGGTTG AAAGTTCAGA TACTATTGAT AATGTTAAAG CTAAGATTCA GGATAAGGAA GGAATCCCTC CGGATCAGCA GAGGCTTATC TTTGCTGGTA AGCAGCTTGA GGACGGTCGC ACACTCGCTG ATTACAATAT CCAGAAAGAG TCTACACTTC ATTTGGTGCT TCGTCTTAGA GGTGGTATGC AGATTTTTGT GAAGACCCTC ACTGGAAAGA CCATTACTTT GGAGGTTGAG AGCTCAGACA CTATCGATAA TGTTAAAGCT AAGATCCAGG ACAAGGAAGG GATCCCACCA GACCAACAGA GACTCATCTT CGCTGGTAAA CAGCTCGAGG ATGGTCGGAC TTTGGCTGAC TACAACATCC AGAAGGAATC TACCCTTCAC CTTGTGTTGC GTCTTCGTGG TGGTATGCAA ATATTTGTGA AAACTTTGAC AGGCAAGACC ATTACGTTGG AGGTTGAGAG CTCAGACACA ATCGATAACG TCAAGGCTAA GATTCAGGAC AAGGAGGGGA TCCCACCAGA CCAACAGAGG CTTATCTTTG CCGGTAAGCA GCTTGAAGAT GGACGCACCC TTGCTGATTA CAACATCCAA AAGGAGTCTA CCCTCCATCT TGTGCTTCGT CTCCGTGGTG GTATGCAGAT CTTTGTGAAG ACCCTTACCG GGAAAACCAT TACTCTGGAG GTTGAGAGTT CCGATACTAT CGATAATGTT AAAGCTAAGA TCCAGGACAA GGAGGGGATC CCACCAGACC AACAGAGACT CATCTTCGCT GGGAAACAGC TTGAGGATGG ACGGACTTTG GCTGATTACA ACATCCAGAA GGAATCTACC CTTCACCTTG TGTTGCGTCT GCGTGGTGGT ATGCAAATCT TTGTGAAGAC TTTGACAGGC AAGACTATTA CCTTGGAGGT TGAGAGCTCA GACACTATCG ATAATGTCAA GGCTAAGATT CAGGACAAGG AGGGGATCCC ACCAGACCAA CAGAGGCTCA TCTTCGCTGG TAAACAGCTC GAGGATGGTC GCACGTTGGC TGATTACAAC ATCCAGAAGG AGTCGACTCT TCACTTGGTT CTTCGTCTTC GTGGTGGAAG TGTAAACTCG TCAAAATATG GGATTGGGTC TATCATCTAT GGGAGGGTAT TTTGTTTGGC TAGTATGAAT TTTTTTTTGT AGTAGTGAAA ATGTTCTAGT TAT 
Length1493
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8628003.. 8629780
Download Sequence
A.thaliana
AGI-codeAT5G20620.1
Descriptionubiquitin 4
TAIR curator summaryencodes a ubiquitin polyprotein.
Alias[UBQ4][ubiquitin 4]
Gene coexpression
MR
MR Locus Description
1 Ahg482268 ubiquitin 4
1.73205 Ahg925527 ubiquitin 4
2 Ahg488966 ubiquitin 4
13.6015 Ahg887462 Protein of unknown function DUF2359, transmembrane
26.0768 Ahg475688 microsomal glutathione s-transferase, putative
31.6228 Ahg907524 glutathione S-transferase TAU 15
33.7639 Ahg907518 glutathione S-transferase TAU 16
33.8821 Ahg487672 alpha-galactosidase 1
38.4187 Ahg490984 alpha/beta-Hydrolases superfamily protein
44.587 Ahg914132
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression