Detail



ID : Ahg488966

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488966|fgenesh2_kg.6__2100__AT5G20620.1
Sequence
AAAAAACCCT AGATCGCTCT TCAAATCTCT TCCTAACGAT TCTCTCTTTC AAGATGCAAG TTTTTGTGAA AACACTCACT GGTAAGACCA TCACTCTCGA GGTTGAGAGT TCTGACACCA TCGACAATGT TAAGGCAAAG ATCCAGGACA AGGAAGGTAT TCCTCCGGAC CAGCAAAGAT TGATCTTCGC TGGTAAGCAG CTAGAAGATG GCCGTACCTT GGCTGATTAC AATATCCAGA AAGAATCAAC ACTCCATTTG GTTCTCCGGT TAAGAGGTGG TATGCAGATC TTTGTCAAGA CTCTGACTGG CAAAACCATC ACCCTTGAGG TTGAAAGTTC TGACACTATT GACAACGTCA AGGCTAAGAT CCAGGACAAG GAAGGTATCC CTCCGGACCA GCAGAGGCTT ATTTTCGCTG GTAAGCAGCT TGAGGACGGA AGGACTCTTG CTGACTACAA CATCCAGAAG GAGTCGACAC TTCACCTTGT TCTTCGTCTT CGTGGTGGTA TGCAAATCTT TGTGAAGACT CTCACTGGTA AAACAATCAC CCTAGAGGTT GAGAGCTCAG ACACCATTGA CAATGTCAAA GCTAAGATTC AGGATAAAGA GGGAATCCCA CCGGACCAGC AGAGGCTTAT CTTTGCAGGT AAGCAGCTAG AGGATGGTCG CACACTGGCT GACTACAACA TCCAAAAAGA GTCAACCCTC CATTTGGTGC TTCGTCTTAG AGGTGGTATG CAGATCTTTG TGAAGACCCT AACTGGCAAG ACTATCACTT TGGAGGTTGA GAGCTCAGAC ACAATCGATA ACGTCAAGGC AAAGATTCAA GACAAGGAAG GGATCCCACC AGACCAGCAG AGACTCATCT TTGCTGGGAA ACAGCTCGAA GATGGTCGGA CTCTTGCAGA TTACAACATC CAAAAGGAGT CTACCCTCCA TCTTGTGCTT CGTCTCCGTG GTGGTATGCA GATTTTTGTG AAGACACTTA CCGGAAAAAC CATTACTCTT GAGGTCGAGA GCTCAGACAC AATTGATAAT GTCAAGGCTA AGATTCAAGA CAAGGAAGGG ATCCCACCAG ACCAACAGAG ACTCATCTTC GCTGGGAAAC AGCTTGAGGA TGGTCGGACA CTTGCGGATT ACAATATCCA GAAGGAGTCG ACCCTTCACC TTGTGTTGCG TCTTCGTGGT GGAAGCTTCT AAGCTTTTGT GATCTGATGA TAAGTGGTTC TTCGTGTCTC ATGCACTTGG GAGGTGAGAT CTTCTATTTT CTTATGAACC TTTGGTTGCT GTTTCAACTT TTAATAATAA TCCAAGTGCA TGTTAAACAT TCCTCTTTCT AGAAATTATT AT 
Length1352
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8313828.. 8315942
Download Sequence
A.thaliana
AGI-codeAT5G20620.1
Descriptionubiquitin 4
TAIR curator summaryencodes a ubiquitin polyprotein.
Alias[UBQ4][ubiquitin 4]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg482268 ubiquitin 4
2 Ahg925577 ubiquitin 4
5.47723 Ahg490179 polyubiquitin 10
11.3578 Ahg482251 peroxisomal 3-ketoacyl-CoA thiolase 3
15 Ahg475688 microsomal glutathione s-transferase, putative
15.4919 Ahg490270 polyubiquitin 10
16.9411 Ahg927966 Tetratricopeptide repeat (TPR)-like superfamily protein
17.1464 Ahg946890 RmlC-like cupins superfamily protein
21.3307 Ahg471816 Serinc-domain containing serine and sphingolipid biosynthesis protein
23.2379 Ahg937750
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression