Detail



ID : Ahg925857

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925857|scaffold_201418.1
Sequence
CTTCCAAAAC CAAAAAAAAA AAAAAATGGA GATGAGTTTG CGACTCGCTT CATCTTCAAC CTCAAACCCA ATTTGTCTAA TAAATCCAGG AAAAAATCTT AATTTCCCAA TCCGAAACCA GAGAATCCCT AAAACAACGA AACCCTTTTG CGTTAGGTCT TCAATGAGCT CATCTAAACC CAGACAAACC TTATCTAGTA ACTGGGATGT CTCTAGCTTC TCCGTTGATT CCGTTGCTCA ATCTCCTTCA CGGCTTCCAA GTTTCGAAGA ACTCGACACC ACAAACATGT TGCTTCGTCA AAGAATCGTC TTTTTGGGTT CTCAGGTGGA TGATATGACT GCGGATTTGG TTATAAGTCA GCTTTTGTTG CTAGATGCTG AGGACTCAGA GAGAGACATT ACGCTGTTTA TCAATTCGCC CGGTGGATCT ATTACTGCTG GGATGGGAAT ATATGATGCA ATGAAACAAT GTAAGGCGGA TGTATCGACT GTTTGCTTAG GACTAGCTGC ATCTATGGGT GCGTTTCTCC TTGCTTCTGG TTCAAAAGGG AAACGGTATT GCATGCCTAA CTCTAAAGTT ATGATCCATC AGCCACTTGG TACCGCTGGA GGCAAAGCAA CGGAAATGAG CATACGCATA AGAGAAATGA TGTACCACAA GATTAAACTA AACAAGATCT TCTCTAGAAT CACCGGAAAG CCCGAATCAG AGATCGAAGG TGACACAGAC CGTGATAATT TCTTGAATCC ATGGGAAGCG AAAGAATATG GTTTGATCGA TGCTGTAATC GATGATGGGA AACCAGGACT AATCGCTCCA ATCGGAGATG GCACTCCTCC TCCGAAAACC AAAGTCTGGG ATCTTTGGAA AGTTGAAGGA ACCAAGAAAG ACAACACTAA CTTGCCATCC GAGCGCTCAA TGACACAGAA TGGTTATGCT GCCATTGAAT AGAACTTGTG TTCCAGCGTT TA 
Length972
Protein Sequence
Protein Residue
Map Locationscaffold_2: 10907216.. 10908948
Download Sequence
A.thaliana
AGI-codeAT1G66670.1
DescriptionCLP protease proteolytic subunit 3
TAIR curator summaryOne of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).
Alias[CLPP3][NCLPP3][CLP protease proteolytic subunit 3]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg496641 FK506-binding protein 12
3.31662 Ahg896031
4.3589 Ahg490939 Thioredoxin superfamily protein
6.63325 Ahg924211 Esterase/lipase/thioesterase family protein
9.64365 Ahg939601 NAD(P)-binding Rossmann-fold superfamily protein
12.9615 Ahg485161 aldehyde dehydrogenase 2B4
13.5277 Ahg481532 Plant haem oxygenase (decyclizing) family protein
13.9642 Ahg947410 glutamine synthase clone R1
15.4596 Ahg487805 BolA-like family protein
15.4919 Ahg945907 SufE/NifU family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression