Detail



ID : Ahg481532

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481532|fgenesh2_kg.4__592__AT2G26670.1
Sequence
CCTATTTAAA AATTCAATTG GAATTGTGAG TCCCTCTTCT CTATTCCTTC AAGGCAACTA AAACTACATT GCGTGACTTC TTCCGATCAA ATATGGCTTA TTTAGCTCCG ATTTCGTCAT CCTTATCCAT ATTCAAGAAT CCCCAACTCT CAAGATTCCA ATTTTCTTAT TCCCCACCAA ACCCATTTTT CCTTCGACCT AGGATTCAGA TTCTGAGTAT GCCGATGAGC AAGACGCCGT CTTTAGTGGT GGTTGCGGCC ACTACAGCGG CGGAGAAGCA GAAGAAGAGG TATCCTGGAG AATCAAAGGG TTTTGTGGAG GAGATGAGGT TTGTGGCTAT GAGACTACAT ACGAAAGATC AAGCTAAGGA AGGTGAGAAA GAGACTAAAT CTATTGAGGA ACGTCCCGTG GCTAAATGGG AACCGACTGT TGAAGGTTAC TTGAGGTTTC TTGTGGACAG TAAATTGGTT TATGATACTC TTGAACAGAT TATTCAAGAT TCCGATTTCC CAACTTATGC CGAATTCAAG AACACGGGGC TGGAAAGGGC GGAGAAATTG GCCACGGATT TGGAGTGGTT CAAGGAACAA GGCTACGAGA TTCCAGAACC AACTGCTCCT GGTAAAACAT ATTCTCAGTA TTTAAGGGAA TTAGCAGAGA AGGATCCTCA AGCATTCATT TGTCACTTCT ACAACATCTA CTTCGCCCAT AGTGCTGGTG GACGAATGAT TGGCAGAAAG GTAGCTGAGA GAATACTTGA CAATAGAGAA CTCGAGTTCT ACAAATGGGA CGGCGAACTA TCCCAATTGT TGCAGAACGT TAGGGAGAAA CTGAACAAAG TTGCCGAGGA GTGGACGAGA GAAGAAAAGA ATCATTGTTT GGAAGAGACG GAGAAATCGT TCAAGTATTC TGGTGAAATA CTTCGTCTGA TATTGTCCTG ATTTGAATCG CAGTGTCTCT AGATATCTCA ATACGGCTTG TGGCAACTAA AATCCTGCAC ATTGTTTATA TTCCTGCATT ATATTCATCA TCTTCTACTT CTTGTTAAAC TCTTCTTTGC TTCAAAGCTA TTACTAAGTT CATGGTTCAA ATTAATAACT TTTCCACCAT TT 
Length1112
Protein Sequence
Protein Residue
Map Locationscaffold_4: 9480301.. 9482266
Download Sequence
A.thaliana
AGI-codeAT2G26670.1
DescriptionPlant haem oxygenase (decyclizing) family protein
TAIR curator summaryEncodes a plastid heme oxygenase necessary for phytochrome chromophore biosynthesis and for coupling the expression of some nuclear genes to the functional state of the chloroplast.
Alias[ATHO1][GUN2][HO1][HY1][HY6][TED4][ARABIDOPSIS THALIANA HEME OXYGENASE 1][GENOMES UNCOUPLED 2][HEME OXYGENASE 1][HEME OXYGENASE 6][REVERSAL OF THE DET PHENOTYPE 4]
Gene coexpression
MR
MR Locus Description
9.53939 Ahg944429 LYR family of Fe/S cluster biogenesis protein
13.5277 Ahg925857 CLP protease proteolytic subunit 3
22.3607 Ahg481487 CTC-interacting domain 7
23.8328 Ahg938681 Tetratricopeptide repeat (TPR)-like superfamily protein
28.3901 Ahg487117 5'-AMP-activated protein kinase-related
30.7409 Ahg487407 NAD(P)-binding Rossmann-fold superfamily protein
32.0312 Ahg489422 Tetratricopeptide repeat (TPR)-like superfamily protein
33.4813 Ahg919222 TraB family protein
33.9853 Ahg896031
45.299 Ahg898177 MMS ZWEI homologue 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression