| Annotation |
|---|
| Description | jgi|Araly1|926474|scaffold_202035.1 |
| Sequence |
AAAATTGATT CCTTTTGAAA AAATGGAGGG TTCGTCGTCG ACCATTGCAA GGAAGACATG GGAATTGGAG AACAACATTC TAACAGTAGA CTCACCTGAT TCAACCTCCG ATAACATCTT CTACTTCGAC GATACTTCGC AAAGTAGGTT CCAGCAAGAG AAGCCATGGG AGAATGATCC TCACTACTTC AAACGAGTCA AGATCTCAGC GCTTGCCCTT CTTAAGATGG TGGTTCACGC TCGCTCTGGT GGAACAATTG AAATAATGGG TCTTATGCAG GGTAAGACTG ATGGTGATGC TATCATTGTT ATGGATGCTT TCGCTTTGCC AGTGGAAGGA ACTGAGACAA GGGTTAATGC TCAGGCTGAT GCTTATGAGT ACATGGTTGA GTATTCTCAG ACCAACAAGC TCGCGGGGCG GTTGGAGAAT GTTGTTGGGT GGTATCACTC TCACCCTGGA TATGGATGCT GGCTCTCGGG TATTGATGTT TCTACGCAGA GGCTTAACCA ACAGTATCAG GAGCCATTTT TAGCTGTTGT TATTGATCCC ACAAGGACTG TTTCAGCTGG TAAGGTTGAG ATTGGTGCAT TCAGAACATA CTCAGAAGGA TATAAGCCTC CGGATGAACC TGTTTCCGAG TATCAGACTA TTCCTTTAAA TAAGATCGAG GACTTTGGTG TTCACTGCAA GCAGTACTAT TCATTAGATA TCACTTATTT CAAGTCATCT CTTGATTCTC ATCTTCTGGA TCTCCTATGG AACAAGTATT GGGTGAACAC TCTTTCTTCT TCTCCACTGC TGGGCAATGG AGACTATGTT GCCGGACAAA TATCAGACTT GGCTGAGAAG CTTGAGCAAG CGGAGAATCA TCTGGCTCAT TCTCGCGGAG GAACTGTGCC ATCATCCCTT CATAGGAAAA AAGAGGATGA GTCTCAACTA ACTAAGATAA CTAGGGATAG CTCAAAGATA ACTGTGGAAC AGGTCCATGG ACTAATGTCG CAGGTCATCA AAGATGTATT ATTCAACTCA ATACGTCAGT CCAACAACAA ATCTTCCACT GACTCGTCGG ATCCAGAGCC TATGATTACA CCTTGAAGTT GCTCTTCTTT TGGTTT |
| Length | 1116 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 13965448.. 13967259 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G71230.1 |
| Description | COP9-signalosome 5B |
| TAIR curator summary | Encodes a subunit of the COP9 complex, similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Involved in protein deneddylation. Double mutants with CSN5A are constitutively photomorphogenic (de-etiolated) and have abnormal auxin responses. |
| Alias | [AJH2][CSN5][CSN5B][COP9-signalosome 5B] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 27.9106 |
Ahg925797 | myb domain protein 90 |
| 51.9615 |
Ahg329509 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 54.5527 |
Ahg922994 | related to AP2 1 |
| 55.3715 |
Ahg893702 | Sodium/calcium exchanger family protein |
| 71.6659 |
Ahg316069 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| 77.6209 |
Ahg315131 | beta vacuolar processing enzyme |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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